RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 HSPA9P38646 679 aaKnown RBP16.11■□□□□ 0.17
RAB3D-202ENST00000589655 ACTR1BP42025 376 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 ACTR1AP61163 376 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 DPTQ07507 201 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 SRSF1Q07955 248 aaKnown RBP eCLIP16.11■□□□□ 0.17
RAB3D-202ENST00000589655 DPYSL2Q16555 572 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 COLEC12Q5KU26 742 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 TXNRD3NBQ6F5E7 133 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 DOK6Q6PKX4 331 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 ZNF571Q7Z3V5 609 aaPredicted RBP16.11■□□□□ 0.17
RAB3D-202ENST00000589655 POLNQ7Z5Q5 900 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 TRIM74Q86UV6 250 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 ZNF761Q86XN6 746 aaPredicted RBP16.11■□□□□ 0.17
RAB3D-202ENST00000589655 BMPERQ8N8U9 685 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 AGBL5Q8NDL9 886 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 DDA1Q9BW61 102 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 SPRY4Q9C004 299 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 CDH19Q9H159 772 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 ABCG8Q9H221 673 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 KCTD5Q9NXV2 234 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 PDP2Q9P2J9 529 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 CD84Q9UIB8 345 aa16.11■□□□□ 0.17
RAB3D-202ENST00000589655 PCYT1BQ9Y5K3 369 aaPredicted RBP16.11■□□□□ 0.17
RAB3D-202ENST00000589655 DOPEY2Q9Y3R5 2298 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 GOLGA6CA6NDK9 693 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 GOLGA6BA6NDN3 693 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 LRRC53A6NM62 1247 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 DDX3XO00571 662 aaKnown RBP eCLIP16.1■□□□□ 0.175e-9■■■■■ 31.7
RAB3D-202ENST00000589655 FZD6O60353 706 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 FTLP02792 175 aaPredicted RBP16.1■□□□□ 0.17
RAB3D-202ENST00000589655 CCDC172P0C7W6 258 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 GOLGA6DP0CG33 693 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 CYP2A6P11509 494 aaPredicted RBP16.1■□□□□ 0.17
RAB3D-202ENST00000589655 ATP1A2P50993 1020 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 ZNF135P52742 658 aaPredicted RBP16.1■□□□□ 0.17
RAB3D-202ENST00000589655 TLE1Q04724 770 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 SMTNL2Q2TAL5 461 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 PYCR3Q53H96 274 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 CLEC17AQ6ZS10 378 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 ANKRD20A12PQ8NF67 263 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 SCAMP4Q969E2 229 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 CSPG4P5Q96PW8 444 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 OR2M4Q96R27 311 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 AGAP2Q99490 1192 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 ZWILCHQ9H900 591 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 GOLGA6AQ9NYA3 693 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 KCNK4Q9NYG8 393 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 CNOT8Q9UFF9 292 aaKnown RBP16.1■□□□□ 0.17
RAB3D-202ENST00000589655 MYO6Q9UM54 1294 aa16.1■□□□□ 0.17
RAB3D-202ENST00000589655 TRBV23OR9-2A0A075B6M9 112 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 H3BRJ5 948 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 GZMAP12544 262 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 PCK1P35558 622 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 GPR1P46091 355 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 FASLGP48023 281 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 PTSQ03393 145 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 LRRC66Q68CR7 880 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 ANKS6Q68DC2 871 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 PPP1R2P3Q6NXS1 205 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 TMEM71Q6P5X7 295 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 BORAQ6PGQ7 559 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 TMCO3Q6UWJ1 677 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 ADAMTSL4Q6UY14 1074 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 PTRH1Q86Y79 214 aaKnown RBP16.09■□□□□ 0.17
RAB3D-202ENST00000589655 IL22RA1Q8N6P7 574 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 SLC37A2Q8TED4 501 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 ADNPQ9H2P0 1102 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 HAUS4Q9H6D7 363 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 SLC39A1Q9NY26 324 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 PILRAQ9UKJ1 303 aa16.09■□□□□ 0.17
RAB3D-202ENST00000589655 EFCAB7A8K855 629 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 B4E171 279 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 ZW10O43264 779 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 RAD1O60671 282 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 RARAP10276 462 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
RAB3D-202ENST00000589655 CSTF2P33240 577 aaKnown RBP eCLIP16.08■□□□□ 0.16
RAB3D-202ENST00000589655 TSPAN7P41732 249 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 MMP13P45452 471 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 POLE2P56282 527 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 BIRC2Q13490 618 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 RALGPS1Q5JS13 557 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.08■□□□□ 0.16
RAB3D-202ENST00000589655 ARMC12Q5T9G4 340 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 USP45Q70EL2 814 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 MARK2Q7KZI7 788 aaKnown RBP16.08■□□□□ 0.16
RAB3D-202ENST00000589655 CACNA2D3Q8IZS8 1091 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 SFRP1Q8N474 314 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 TEX26Q8N6G2 289 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 ZNF564Q8TBZ8 553 aaPredicted RBP16.08■□□□□ 0.16
RAB3D-202ENST00000589655 ZNF653Q96CK0 615 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 AP2M1Q96CW1 435 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 COX14Q96I36 57 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.08■□□□□ 0.16
RAB3D-202ENST00000589655 ANO10Q9NW15 660 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 NBASA2RRP1 2371 aa16.08■□□□□ 0.16
RAB3D-202ENST00000589655 NKX2-8O15522 239 aa16.07■□□□□ 0.16
RAB3D-202ENST00000589655 DUX1O43812 170 aa16.07■□□□□ 0.16
RAB3D-202ENST00000589655 IL4RP24394 825 aa16.07■□□□□ 0.16
RAB3D-202ENST00000589655 ARL4AP40617 200 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms