RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ZNF781Q8N8C0 355 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 OR2AP1Q8NGE2 309 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 SHKBP1Q8TBC3 707 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 SH3RF2Q8TEC5 729 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 LPGAT1Q92604 370 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 KCNJ9Q92806 393 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 MCUR1Q96AQ8 359 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 MYO19Q96H55 970 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 EXOC2Q96KP1 924 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 LMLNQ96KR4 655 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 ZNF641Q96N77 438 aaPredicted RBP10.37□□□□□ -0.75
VPS25-203ENST00000589520 SUDS3Q9H7L9 328 aaPredicted RBP10.37□□□□□ -0.75
VPS25-203ENST00000589520 ZFYVE1Q9HBF4 777 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 TCF7L2Q9NQB0 619 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 TDP1Q9NUW8 608 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 MARK1Q9P0L2 795 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 HS3ST2Q9Y278 367 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 CRYL1Q9Y2S2 319 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 FCF1Q9Y324 198 aaKnown RBP10.37□□□□□ -0.75
VPS25-203ENST00000589520 PPIL1Q9Y3C6 166 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 ZNF711Q9Y462 761 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 PCDHB9Q9Y5E1 797 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 ACTL7AQ9Y615 435 aa10.37□□□□□ -0.75
VPS25-203ENST00000589520 A0A0J9YYE9 177 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 B2RBV5 119 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 AURKAO14965 403 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 DIAPH2O60879 1101 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 POP4O95707 220 aaKnown RBP10.36□□□□□ -0.75
VPS25-203ENST00000589520 TRBC1P01850 177 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 ZNF37AP17032 561 aaPredicted RBP10.36□□□□□ -0.75
VPS25-203ENST00000589520 ZNF7P17097 686 aaPredicted RBP10.36□□□□□ -0.75
VPS25-203ENST00000589520 ABL2P42684 1182 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 NUMBP49757 651 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 ALDH18A1P54886 795 aaKnown RBP10.36□□□□□ -0.75
VPS25-203ENST00000589520 CDKN2DP55273 166 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 ZNF460Q14592 562 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 GRAMD4Q6IC98 578 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 ZNF549Q6P9A3 640 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 APCDD1Q8J025 514 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 CEP70Q8NHQ1 597 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 HCAR2Q8TDS4 363 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 IRF7Q92985 503 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 KIAA1191Q96A73 305 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 PDLIM5Q96HC4 596 aaKnown RBP10.36□□□□□ -0.75
VPS25-203ENST00000589520 EBF4Q9BQW3 602 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 POMKQ9H5K3 350 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 PFDN4Q9NQP4 134 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 TAS2R1Q9NYW7 299 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 CXXC1Q9P0U4 656 aaPredicted RBP10.36□□□□□ -0.75
VPS25-203ENST00000589520 SLC8A2Q9UPR5 921 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 CDYLQ9Y232 598 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 STK38LQ9Y2H1 464 aa10.36□□□□□ -0.75
VPS25-203ENST00000589520 OAS3Q9Y6K5 1087 aaKnown RBP10.36□□□□□ -0.75
VPS25-203ENST00000589520 EYSQ5T1H1 3165 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 UBA6A0AVT1 1052 aaPredicted RBP10.35□□□□□ -0.75
VPS25-203ENST00000589520 LINC01553A4QN01 128 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 OR51F1A6NGY5 319 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 A8MT66 165 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 HIDE1A8MVS5 230 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 STX16-NPEPL1H3BU86 382 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 STX16O14662 325 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 PRMT5O14744 637 aaPredicted RBP10.35□□□□□ -0.75
VPS25-203ENST00000589520 KERAO60938 352 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 CLASP2O75122 1294 aaKnown RBP10.35□□□□□ -0.75
VPS25-203ENST00000589520 PAPLNO95428 1278 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 RHOP08100 348 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 FGF4P08620 206 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 F7P08709 466 aaPredicted RBP10.35□□□□□ -0.75
VPS25-203ENST00000589520 PIRTP0C851 137 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 THRAP10827 490 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 ITGALP20701 1170 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 FMO4P31512 558 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 ARRB2P32121 409 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 NNMTP40261 264 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 RAP1GDS1P52306 607 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 CDC16Q13042 620 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 PEX6Q13608 980 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 HERC3Q15034 1050 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 TEAD2Q15562 447 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 PTPRNQ16849 979 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 MYLK3Q32MK0 819 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 CARD16Q5EG05 197 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 ZRANB3Q5FWF4 1079 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 TPGS1Q6ZTW0 290 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 FRMD7Q6ZUT3 714 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 SNX20Q7Z614 316 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 LDB1Q86U70 411 aaPredicted RBP10.35□□□□□ -0.75
VPS25-203ENST00000589520 RNF135Q8IUD6 432 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 LSMEM2Q8N112 164 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 CHCHD4Q8N4Q1 142 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 CCNYL1Q8N7R7 359 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 KDM1BQ8NB78 822 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 TXNDC5Q8NBS9 432 aaKnown RBP10.35□□□□□ -0.75
VPS25-203ENST00000589520 WFDC5Q8TCV5 224 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 DTX3LQ8TDB6 740 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 ACTRT2Q8TDY3 377 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 SLC22A17Q8WUG5 538 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 LRIG1Q96JA1 1093 aa10.35□□□□□ -0.75
VPS25-203ENST00000589520 MAELQ96JY0 434 aaKnown RBP10.35□□□□□ -0.75
VPS25-203ENST00000589520 NSMCE3Q96MG7 304 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms