RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 OGNP20774 298 aaKnown RBP22.21■■□□□ 1.15
ATG4D-209ENST00000588857 LEPRP48357 1165 aaKnown RBP22.21■■□□□ 1.15
ATG4D-209ENST00000588857 CD151P48509 253 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 NEK3P51956 506 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 PTPN5P54829 565 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 SATB1Q01826 763 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 ELP6Q0PNE2 266 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 ZRANB3Q5FWF4 1079 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 ZDHHC20Q5W0Z9 365 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 ERN2Q76MJ5 926 aaKnown RBP22.21■■□□□ 1.15
ATG4D-209ENST00000588857 BMP8AQ7Z5Y6 402 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 GALNT7Q86SF2 657 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 C4orf33Q8N1A6 199 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 OR2T3Q8NH03 318 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 MCMBPQ9BTE3 642 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 HDAC8Q9BY41 377 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 FBRSQ9HAH7 460 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 KCNK9Q9NPC2 374 aa22.21■■□□□ 1.15
ATG4D-209ENST00000588857 FBXO6Q9NRD1 293 aaPredicted RBP22.21■■□□□ 1.15
ATG4D-209ENST00000588857 TRIOO75962 3097 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 PFDN6O15212 129 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 ADH1BP00325 375 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 ADRB3P13945 408 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 BPIP17213 487 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 CD72P21854 359 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 GABRB3P28472 473 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 SPAM1P38567 509 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 MMP12P39900 470 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 ABCG1P45844 678 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 STC1P52823 247 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 ILF2Q12905 390 aaKnown RBP22.2■■□□□ 1.14
ATG4D-209ENST00000588857 PEX6Q13608 980 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 CST6Q15828 149 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 ZNF852Q6ZMS4 543 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 KDM7AQ6ZMT4 941 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 TIFABQ6ZNK6 161 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 LDB1Q86U70 411 aaPredicted RBP22.2■■□□□ 1.14
ATG4D-209ENST00000588857 SCG3Q8WXD2 468 aaKnown RBP22.2■■□□□ 1.14
ATG4D-209ENST00000588857 SERAC1Q96JX3 654 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 PKD2L2Q9NZM6 624 aa22.2■■□□□ 1.14
ATG4D-209ENST00000588857 GOLGA8RI6L899 631 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 ADAM23O75077 832 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 HAUS5O94927 633 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 S1PR4O95977 384 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 CREB1P16220 341 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 FOXN2P32314 431 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 XIAPP98170 497 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 CACNG1Q06432 222 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 AARS2Q5JTZ9 985 aaKnown RBP22.19■■□□□ 1.14
ATG4D-209ENST00000588857 ZNF776Q68DI1 518 aaPredicted RBP22.19■■□□□ 1.14
ATG4D-209ENST00000588857 FAM151BQ6UXP7 276 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 DCLK2Q8N568 766 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.19■■□□□ 1.14
ATG4D-209ENST00000588857 RAB7BQ96AH8 199 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 ALKBH8Q96BT7 664 aaKnown RBP22.19■■□□□ 1.14
ATG4D-209ENST00000588857 TCF12Q99081 682 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 CNOT10Q9H9A5 744 aaKnown RBP22.19■■□□□ 1.14
ATG4D-209ENST00000588857 IL26Q9NPH9 171 aa22.19■■□□□ 1.14
ATG4D-209ENST00000588857 NDRG2Q9UN36 371 aaKnown RBP22.19■■□□□ 1.14
ATG4D-209ENST00000588857 MTO1Q9Y2Z2 717 aaKnown RBP22.19■■□□□ 1.14
ATG4D-209ENST00000588857 GLYATL1P3A0A0U1RQE8 302 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 SHISA7A6NL88 538 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 SRP72O76094 671 aaKnown RBP22.18■■□□□ 1.14
ATG4D-209ENST00000588857 PRAMEF1O95521 474 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 C1SP09871 688 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 ELFN1P0C7U0 828 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 PYGBP11216 843 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 C5AR1P21730 350 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 ATP1A2P50993 1020 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 GYS2P54840 703 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 CCINQ13939 588 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 SEMA3AQ14563 771 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 TYSND1Q2T9J0 566 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 HSF5Q4G112 596 aaPredicted RBP22.18■■□□□ 1.14
ATG4D-209ENST00000588857 KIAA1211LQ6NV74 962 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 TAS2R42Q7RTR8 314 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 RPLP0P6Q8NHW5 317 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 KLF6Q99612 283 aaPredicted RBP22.18■■□□□ 1.14
ATG4D-209ENST00000588857 GPR22Q99680 433 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 FAM96AQ9H5X1 160 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 INTS10Q9NVR2 710 aaKnown RBP22.18■■□□□ 1.14
ATG4D-209ENST00000588857 CA14Q9ULX7 337 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 VPS9D1Q9Y2B5 631 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 TECTAO75443 2155 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 LRRK1Q38SD2 2015 aa22.18■■□□□ 1.14
ATG4D-209ENST00000588857 PLK4O00444 970 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 NEMP1O14524 444 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 MID1O15344 667 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 RFPL1O75677 317 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 ITGALP20701 1170 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 COL9A1P20849 921 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 P2RY2P41231 377 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 SPINT3P49223 89 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 TTPAP49638 278 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 SERPINB8P50452 374 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 PRKCQQ04759 706 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 CCDC15Q0P6D6 951 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 CNTN1Q12860 1018 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 RALGDSQ12967 914 aa22.17■■□□□ 1.14
ATG4D-209ENST00000588857 EOGTQ5NDL2 527 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms