RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 SLC1A5Q15758 541 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 PARP6Q2NL67 630 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 P3H1Q32P28 736 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 PROX2Q3B8N5 592 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 KDM7AQ6ZMT4 941 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 LYSMD3Q7Z3D4 306 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 RD3Q7Z3Z2 195 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 RAB44Q7Z6P3 723 aaPredicted RBP10.07□□□□□ -0.8
TPM4-207ENST00000588032 SLCO6A1Q86UG4 719 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 HEATR4Q86WZ0 1026 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 GKN2Q86XP6 184 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 IPMKQ8NFU5 416 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 DTX3LQ8TDB6 740 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 GLMNQ92990 594 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 SCAMP4Q969E2 229 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 TSACCQ96A04 125 aaPredicted RBP10.07□□□□□ -0.8
TPM4-207ENST00000588032 OXNAD1Q96HP4 312 aaPredicted RBP10.07□□□□□ -0.8
TPM4-207ENST00000588032 HIC2Q96JB3 615 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 SMIM14Q96QK8 99 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 FAM118BQ9BPY3 351 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 RIOK2Q9BVS4 552 aaKnown RBP10.07□□□□□ -0.8
TPM4-207ENST00000588032 LGR4Q9BXB1 951 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 TLR10Q9BXR5 811 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 GPR63Q9BZJ6 419 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 C10orf88Q9H8K7 445 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 TOR4AQ9NXH8 423 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.07□□□□□ -0.84e-8■■■□□ 17.1
TPM4-207ENST00000588032 NFKBIL1Q9UBC1 381 aaPredicted RBP10.07□□□□□ -0.8
TPM4-207ENST00000588032 FEZ2Q9UHY8 353 aaPredicted RBP10.07□□□□□ -0.8
TPM4-207ENST00000588032 DOLKQ9UPQ8 538 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 ZNF711Q9Y462 761 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 JRKLQ9Y4A0 524 aa10.07□□□□□ -0.8
TPM4-207ENST00000588032 PCNX2A6NKB5 2137 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 A0A0U1RQS6 177 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 TCRBV7S2A1N4TA0A589 114 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 PRSS38A1L453 326 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 FAM221BA6H8Z2 402 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 LIASO43766 372 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 PPFIA2O75334 1257 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 RFPL3O75679 317 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 SOD1P00441 154 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 CKMT1AP12532 417 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 ACTN2P35609 894 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 RPIAP49247 311 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 ACADVLP49748 655 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 DAB2P98082 770 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 FOXC1Q12948 553 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 PEX6Q13608 980 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 CCNG2Q16589 344 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 SIRPB2Q5JXA9 342 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 HENMT1Q5T8I9 393 aaKnown RBP10.06□□□□□ -0.8
TPM4-207ENST00000588032 PDPK2PQ6A1A2 396 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 RANBP10Q6VN20 620 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 ARHGEF18Q6ZSZ5 1173 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 RFLNAQ6ZTI6 216 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 KLHDC8BQ8IXV7 354 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 RBFAQ8N0V3 343 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 PELI3Q8N2H9 469 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 GALNT15Q8N3T1 639 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 FAM71DQ8N9W8 422 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 CCDC110Q8TBZ0 833 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 RTP4Q96DX8 246 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 APOLD1Q96LR9 279 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 C19orf43Q9BQ61 176 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 TMEM121Q9BTD3 319 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 ZSCAN5AQ9BUG6 496 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 LRRC61Q9BV99 259 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 FRMD8Q9BZ67 464 aaPredicted RBP10.06□□□□□ -0.8
TPM4-207ENST00000588032 TCEAL2Q9H3H9 227 aaPredicted RBP10.06□□□□□ -0.8
TPM4-207ENST00000588032 ARNT2Q9HBZ2 717 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 FGF22Q9HCT0 170 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 HOMER3Q9NSC5 361 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 TRNAU1APQ9NX07 287 aaKnown RBP10.06□□□□□ -0.8
TPM4-207ENST00000588032 CD84Q9UIB8 345 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 PNMA8BQ9ULN7 279 aaPredicted RBP10.06□□□□□ -0.8
TPM4-207ENST00000588032 WASF3Q9UPY6 502 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 SHOC2Q9UQ13 582 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 SLC17A4Q9Y2C5 497 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 R3HDM2Q9Y2K5 976 aaKnown RBP10.06□□□□□ -0.8
TPM4-207ENST00000588032 CFAP54Q96N23 3096 aa10.06□□□□□ -0.8
TPM4-207ENST00000588032 YY2O15391 372 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 AGTP01019 485 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 CEACAM5P06731 702 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 GP1BAP07359 652 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 IVLP07476 585 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 PIRTP0C851 137 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 PSMB4P28070 264 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 ADRA1AP35348 466 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 PDE1BQ01064 536 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 C1orf61Q13536 156 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 GSE1Q14687 1217 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 DEFB133Q30KQ1 61 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 C6orf132Q5T0Z8 1188 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 FAM182AQ5T1J6 154 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 DRICH1Q6PGQ1 229 aaPredicted RBP10.05□□□□□ -0.8
TPM4-207ENST00000588032 REXO1L1PQ8IX06 675 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 CACTIN-AS1Q8N1I8 211 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 CHCHD4Q8N4Q1 142 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 SLC25A41Q8N5S1 370 aa10.05□□□□□ -0.8
TPM4-207ENST00000588032 TRAM1L1Q8N609 369 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms