RNA–Protein interactions for RNA: ENST00000587774.1

TRIM47-205, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 720 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-205ENST00000587774 TDRD1Q9BXT4 1180 aaKnown RBP18.72■□□□□ 0.59
TRIM47-205ENST00000587774 XPO4Q9C0E2 1151 aaKnown RBP18.72■□□□□ 0.59
TRIM47-205ENST00000587774 ABCG8Q9H221 673 aa18.72■□□□□ 0.59
TRIM47-205ENST00000587774 UVRAGQ9P2Y5 699 aa18.72■□□□□ 0.59
TRIM47-205ENST00000587774 PISDQ9UG56 409 aa18.72■□□□□ 0.59
TRIM47-205ENST00000587774 LOXL2Q9Y4K0 774 aa18.72■□□□□ 0.59
TRIM47-205ENST00000587774 PCDHGA7Q9Y5G6 932 aa18.72■□□□□ 0.59
TRIM47-205ENST00000587774 CAPN8A6NHC0 703 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 MATN3O15232 486 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 FGF1P05230 155 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 HLA-DQB2P05538 268 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 IVLP07476 585 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 JMJD7P0C870 316 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 ITIH1P19827 911 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 HNRNPH3P31942 346 aaKnown RBP18.71■□□□□ 0.59
TRIM47-205ENST00000587774 RHDQ02161 417 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 GBE1Q04446 702 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 ZFP36L1Q07352 338 aaKnown RBP18.71■□□□□ 0.59
TRIM47-205ENST00000587774 PDK2Q15119 407 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 SLC18A3Q16572 532 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 MAP9Q49MG5 647 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 ADAMTSL4Q6UY14 1074 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 ZNF438Q7Z4V0 828 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 TRIM74Q86UV6 250 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 C17orf82Q86X59 251 aaPredicted RBP18.71■□□□□ 0.59
TRIM47-205ENST00000587774 SLITRK4Q8IW52 837 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 NDUFAF2Q8N183 169 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 PQLC3Q8N755 202 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 PATE1Q8WXA2 126 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 CTNNBL1Q8WYA6 563 aaPredicted RBP18.71■□□□□ 0.59
TRIM47-205ENST00000587774 SCAMP4Q969E2 229 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 FATE1Q969F0 183 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 FAF2Q96CS3 445 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 AP2M1Q96CW1 435 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 TSGA13Q96PP4 275 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 RDH14Q9HBH5 336 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 RBM22Q9NW64 420 aaKnown RBP eCLIP18.71■□□□□ 0.59
TRIM47-205ENST00000587774 CHKBQ9Y259 395 aa18.71■□□□□ 0.59
TRIM47-205ENST00000587774 SETXQ7Z333 2677 aaKnown RBP18.71■□□□□ 0.59
TRIM47-205ENST00000587774 K7ENP7 123 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 ECEL1O95672 775 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 KRT10P13645 584 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 ZNF30P17039 623 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 CCNCP24863 283 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 ADCY8P40145 1251 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 STC1P52823 247 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 EPHB1P54762 984 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 B4GALNT1Q00973 533 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 CTBSQ01459 385 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 PTSQ03393 145 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 ZSCAN23Q3MJ62 389 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 TAF1BQ53T94 588 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-205ENST00000587774 INO80CQ6PI98 192 aaPredicted RBP18.7■□□□□ 0.58
TRIM47-205ENST00000587774 ZNF843Q8N446 348 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 ARRDC2Q8TBH0 407 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 HDAC11Q96DB2 347 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 AGAP2Q99490 1192 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 CDH19Q9H159 772 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 SEMA6CQ9H3T2 930 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.7■□□□□ 0.58
TRIM47-205ENST00000587774 AMACRQ9UHK6 382 aa18.7■□□□□ 0.58
TRIM47-205ENST00000587774 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRIM47-205ENST00000587774 KRT7P08729 469 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 H2AFZP0C0S5 128 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 MAN1A1P33908 653 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 ETV5P41161 510 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 OR1D5P58170 312 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 NIPAL4Q0D2K0 466 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 SLC10A2Q12908 348 aaPredicted RBP18.69■□□□□ 0.58
TRIM47-205ENST00000587774 NR1D2Q14995 579 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 PHF19Q5T6S3 580 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 CCDC81Q6ZN84 652 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 H2AFVQ71UI9 128 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 ZNF765Q7L2R6 523 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 MAP7D3Q8IWC1 876 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 NAGSQ8N159 534 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 TTC9Q92623 222 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 SCARF2Q96GP6 870 aaPredicted RBP18.69■□□□□ 0.58
TRIM47-205ENST00000587774 OR2M4Q96R27 311 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 HAUS2Q9NVX0 235 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 WDR70Q9NW82 654 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 DTLQ9NZJ0 730 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 ACSL6Q9UKU0 697 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 TMEM98Q9Y2Y6 226 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 PLEKHM1Q9Y4G2 1056 aa18.69■□□□□ 0.58
TRIM47-205ENST00000587774 RHPN2P1A8MT19 583 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 B4GAT1O43505 415 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 CPNE6O95741 557 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 PRLP01236 227 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 TPM3P06753 285 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 CA4P22748 312 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 CES1P23141 567 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 ALDH4A1P30038 563 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 ACTR1BP42025 376 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 ACTR1AP61163 376 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 CFHR1Q03591 330 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 C16orf72Q14CZ0 275 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 TGIF1Q15583 401 aa18.68■□□□□ 0.58
TRIM47-205ENST00000587774 ASTE1Q2TB18 679 aaPredicted RBP18.68■□□□□ 0.58
TRIM47-205ENST00000587774 AMZ1Q400G9 498 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms