RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 FGF3P11487 239 aaPredicted RBP19.79■□□□□ 0.76
TRIM47-204ENST00000587339 KPNA2P52292 529 aaKnown RBP19.79■□□□□ 0.76
TRIM47-204ENST00000587339 CACNG1Q06432 222 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 DLG1Q12959 904 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 CSHL1Q14406 222 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 CES4AQ5XG92 561 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 LRRC8EQ6NSJ5 796 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 EP400NLQ6ZTU2 488 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 TAS2R42Q7RTR8 314 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 CPA6Q8N4T0 437 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 SREK1Q8WXA9 508 aaKnown RBP19.79■□□□□ 0.76
TRIM47-204ENST00000587339 GPR78Q96P69 363 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 MCCC1Q96RQ3 725 aaPredicted RBP19.79■□□□□ 0.76
TRIM47-204ENST00000587339 AARSD1Q9BTE6 412 aaKnown RBP19.79■□□□□ 0.76
TRIM47-204ENST00000587339 S1PR5Q9H228 398 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 APPL1Q9UKG1 709 aa19.79■□□□□ 0.76
TRIM47-204ENST00000587339 LEFTY1O75610 366 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 TGDSO95455 350 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 CCDC166P0CW27 439 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 MYL2P10916 166 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 RALBP11234 206 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 FDXRP22570 491 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 GRK2P25098 689 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 OCRLQ01968 901 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 DLX2Q07687 328 aaPredicted RBP19.78■□□□□ 0.76
TRIM47-204ENST00000587339 RUNX3Q13761 415 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 GRM2Q14416 872 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 AGAP9Q5VTM2 703 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 BRAT1Q6PJG6 821 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 CRTC1Q6UUV9 634 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 TSPAN33Q86UF1 283 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 TMEM151AQ8N4L1 468 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 HEXDCQ8WVB3 486 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 NXPE3Q969Y0 559 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 UBXN10Q96LJ8 280 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 TRIM55Q9BYV6 548 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 UNKQ9C0B0 810 aaKnown RBP19.78■□□□□ 0.76
TRIM47-204ENST00000587339 BRD9Q9H8M2 597 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 THAP1Q9NVV9 213 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 XPR1Q9UBH6 696 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 WASF2Q9Y6W5 498 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 SNNO75324 88 aaPredicted RBP19.78■□□□□ 0.76
TRIM47-204ENST00000587339 TBX10O75333 385 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 SRP72O76094 671 aaKnown RBP19.78■□□□□ 0.76
TRIM47-204ENST00000587339 KIAA0754O94854 1291 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 PRAMEF1O95521 474 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 SERPINE1P05121 402 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 LTA4HP09960 611 aaKnown RBP19.78■□□□□ 0.76
TRIM47-204ENST00000587339 LAMP2P13473 410 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 PSMC3P17980 439 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 FMO4P31512 558 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 SLC26A3P40879 764 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 KDSRQ06136 332 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 ITGA9Q13797 1035 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 EIF4HQ15056 248 aaKnown RBP19.78■□□□□ 0.76
TRIM47-204ENST00000587339 ARSIQ5FYB1 569 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 LRRC66Q68CR7 880 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 FAM151BQ6UXP7 276 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 PIM3Q86V86 326 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.78■□□□□ 0.76
TRIM47-204ENST00000587339 RIPOR3Q96MK2 946 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 MTG2Q9H4K7 406 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 IGSF5Q9NSI5 407 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 IL36AQ9UHA7 158 aa19.78■□□□□ 0.76
TRIM47-204ENST00000587339 SEMG2Q02383 582 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 KLC3Q6P597 504 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 ZYG11AQ6WRX3 759 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 ZNF366Q8N895 744 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 LRIG1Q96JA1 1093 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 MRPL57Q9BQC6 102 aaKnown RBP19.77■□□□□ 0.76
TRIM47-204ENST00000587339 KXD1Q9BQD3 176 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 OSBPL1AQ9BXW6 950 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 PLA2G2FQ9BZM2 168 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 MRPL46Q9H2W6 279 aaKnown RBP19.77■□□□□ 0.76
TRIM47-204ENST00000587339 ZNF395Q9H8N7 513 aaPredicted RBP19.77■□□□□ 0.76
TRIM47-204ENST00000587339 POPDC3Q9HBV1 291 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 IL26Q9NPH9 171 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 CLDND1Q9NY35 253 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 GTSE1Q9NYZ3 720 aa19.77■□□□□ 0.76
TRIM47-204ENST00000587339 GPR39O43194 453 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 SBK3P0C264 359 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 BPIP17213 487 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 PDAP1Q13442 181 aaKnown RBP19.76■□□□□ 0.75
TRIM47-204ENST00000587339 CERS6Q6ZMG9 384 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 YTHDF3Q7Z739 585 aaKnown RBP19.76■□□□□ 0.75
TRIM47-204ENST00000587339 CRLF3Q8IUI8 442 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 CBARPQ8N350 705 aaPredicted RBP19.76■□□□□ 0.75
TRIM47-204ENST00000587339 ANKRD49Q8WVL7 239 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 ELSPBP1Q96BH3 223 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 BIRC8Q96P09 236 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 C20orf27Q9GZN8 174 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 OXSMQ9NWU1 459 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 TAS2R13Q9NYV9 303 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 LMCD1Q9NZU5 365 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 DCTN4Q9UJW0 460 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 ATXN2Q99700 1313 aaKnown RBP19.76■□□□□ 0.75
TRIM47-204ENST00000587339 GLYATL1P3A0A0U1RQE8 302 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 TARM1B6A8C7 271 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 OR1I1O60431 355 aa19.76■□□□□ 0.75
TRIM47-204ENST00000587339 TRIM13O60858 407 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms