RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 TMEM35BQ8NCS4 154 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 CASKIN2Q8WXE0 1202 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 C18orf8Q96DM3 657 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 RNF31Q96EP0 1072 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 AHCYL2Q96HN2 611 aaKnown RBP8.55□□□□□ -1.04
SDF2-204ENST00000587338 DPYSL5Q9BPU6 564 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 MAGEB5Q9BZ81 275 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 TRIT1Q9H3H1 467 aaKnown RBP8.55□□□□□ -1.04
SDF2-204ENST00000587338 DEF6Q9H4E7 631 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 APMAPQ9HDC9 416 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 CASS4Q9NQ75 786 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 CUEDC1Q9NWM3 386 aaPredicted RBP8.55□□□□□ -1.04
SDF2-204ENST00000587338 ADGRG4Q8IZF6 3080 aa8.55□□□□□ -1.04
SDF2-204ENST00000587338 A8MX80 341 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 PPM1DO15297 605 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 BUB1BO60566 1050 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 GFPT2O94808 682 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 PLEKP08567 350 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 HOXC4P09017 264 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 MYCLP1P12525 358 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 TNFRSF8P28908 595 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 ADRA1BP35368 520 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 TRIM23P36406 574 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 GABRB2P47870 512 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 GPLD1P80108 840 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 CTBSQ01459 385 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 MC2RQ01718 297 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 NRG1Q02297 640 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 RALGDSQ12967 914 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 ERV3-1Q14264 604 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 GRM3Q14832 879 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 ACOX1Q15067 660 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 C15orf59Q2T9L4 293 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 CRTC2Q53ET0 693 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 TDRD12Q587J7 1177 aaKnown RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 LIPIQ6XZB0 460 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 MAMDC2Q7Z304 686 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 BNIPLQ7Z465 357 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 TMEM135Q86UB9 458 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 TMTC1Q8IUR5 882 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 ESX1Q8N693 406 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 EMC1Q8N766 993 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 OR10G6Q8NH81 332 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 HCAR2Q8TDS4 363 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 PTCD2Q8WV60 388 aaKnown RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 ZNF641Q96N77 438 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 PHF12Q96QT6 1004 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 ZPBPQ9BS86 351 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 NAA15Q9BXJ9 866 aaKnown RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 STK33Q9BYT3 514 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 SPRY4Q9C004 299 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 RETREG1Q9H6L5 497 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 NOL6Q9H6R4 1146 aaKnown RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 METTL5Q9NRN9 209 aaKnown RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 PHPT1Q9NRX4 125 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 UBA2Q9UBT2 640 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 AJAP1Q9UKB5 411 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 TLK1Q9UKI8 766 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 PYCARDQ9ULZ3 195 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 SUFUQ9UMX1 484 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 POLHQ9Y253 713 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 ZKSCAN5Q9Y2L8 839 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 TMEM184BQ9Y519 407 aaPredicted RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 PCDHB3Q9Y5E6 796 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 OAS3Q9Y6K5 1087 aaKnown RBP8.54□□□□□ -1.04
SDF2-204ENST00000587338 RPS6KL1Q9Y6S9 549 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 APCP25054 2843 aa8.54□□□□□ -1.04
SDF2-204ENST00000587338 TRBV23OR9-2A0A075B6M9 112 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 CDC14CA4D256 554 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 CFAP69A5D8W1 941 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 GOLGA6CA6NDK9 693 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 GOLGA6BA6NDN3 693 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 SOWAHDA6NJG2 315 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 RASA4BC9J798 803 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 RASA4O43374 803 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 KATNA1O75449 491 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 KRT38O76015 456 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 DLGAP3O95886 979 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 FUCA1P04066 466 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 PDGFAP04085 211 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 CEACAM5P06731 702 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 FURINP09958 794 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 CCDC172P0C7W6 258 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 GOLGA6DP0CG33 693 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 FERP16591 822 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 GM2AP17900 193 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 F8A1P23610 371 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 EPHB2P29323 1055 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 SERPINA4P29622 427 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 CLCN1P35523 988 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 SOX5P35711 763 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 DLSTP36957 453 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 ACTR1BP42025 376 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 MAPK9P45984 424 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 PMS2P54278 862 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 ACTR1AP61163 376 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 KLHL30Q0D2K2 578 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 SQSTM1Q13501 440 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 PEX6Q13608 980 aa8.53□□□□□ -1.04
SDF2-204ENST00000587338 CYTH1Q15438 398 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms