RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 CCHCR1Q8TD31 782 aa17.63■□□□□ 0.41
TPM4-206ENST00000587201 TFB1MQ8WVM0 346 aaKnown RBP17.63■□□□□ 0.41
TPM4-206ENST00000587201 IMP4Q96G21 291 aaKnown RBP17.63■□□□□ 0.41
TPM4-206ENST00000587201 DCBLD2Q96PD2 775 aa17.63■□□□□ 0.41
TPM4-206ENST00000587201 AGAP2Q99490 1192 aa17.63■□□□□ 0.41
TPM4-206ENST00000587201 RIOK2Q9BVS4 552 aaKnown RBP17.63■□□□□ 0.41
TPM4-206ENST00000587201 GSDMCQ9BYG8 508 aa17.63■□□□□ 0.41
TPM4-206ENST00000587201 SLC25A51Q9H1U9 297 aa17.63■□□□□ 0.41
TPM4-206ENST00000587201 RALYQ9UKM9 306 aaKnown RBP17.63■□□□□ 0.41
TPM4-206ENST00000587201 LHX6Q9UPM6 363 aa17.63■□□□□ 0.41
TPM4-206ENST00000587201 SLC17A4Q9Y2C5 497 aa17.63■□□□□ 0.41
TPM4-206ENST00000587201 ASXL3Q9C0F0 2248 aa17.63■□□□□ 0.41
TPM4-206ENST00000587201 PKD1L2Q7Z442 2459 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 hCG_1818297A0A087WSY0 165 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 CASC3O15234 703 aaKnown RBP17.62■□□□□ 0.41
TPM4-206ENST00000587201 TLX3O43711 291 aaPredicted RBP17.62■□□□□ 0.41
TPM4-206ENST00000587201 SOD1P00441 154 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 FUCA1P04066 466 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 MPOP05164 745 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 PECAM1P16284 738 aaPredicted RBP17.62■□□□□ 0.41
TPM4-206ENST00000587201 ACTN2P35609 894 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 MARCKSL1P49006 195 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 NAP1L1P55209 391 aaKnown RBP17.62■□□□□ 0.41
TPM4-206ENST00000587201 GABREP78334 506 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 ILF3Q12906 894 aaKnown RBP eCLIP17.62■□□□□ 0.41
TPM4-206ENST00000587201 PCSK7Q16549 785 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 TEX44Q53QW1 395 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 OGFOD3Q6PK18 319 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 RAVER1Q8IY67 606 aaKnown RBP17.62■□□□□ 0.41
TPM4-206ENST00000587201 RCOR2Q8IZ40 523 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 EXD1Q8NHP7 514 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 P3H4Q92791 437 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 HAUS1Q96CS2 278 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 RBM41Q96IZ5 413 aaKnown RBP17.62■□□□□ 0.41
TPM4-206ENST00000587201 GLOD4Q9HC38 313 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 TRNAU1APQ9NX07 287 aaKnown RBP17.62■□□□□ 0.41
TPM4-206ENST00000587201 PKD2L2Q9NZM6 624 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 RABGEF1Q9UJ41 708 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 TMEM98Q9Y2Y6 226 aa17.62■□□□□ 0.41
TPM4-206ENST00000587201 ANKRD11Q6UB99 2663 aaPredicted RBP17.61■□□□□ 0.41
TPM4-206ENST00000587201 RCCD1A6NED2 376 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 INPP4BO15327 924 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 ZZEF1O43149 2961 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 NOBOXO60393 691 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 IVLP07476 585 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 FECHP22830 423 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 PTPN3P26045 913 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 CDK18Q07002 472 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 ADCY2Q08462 1091 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 PRKD1Q15139 912 aaPredicted RBP17.61■□□□□ 0.41
TPM4-206ENST00000587201 COL28A1Q2UY09 1125 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 C14orf28Q4W4Y0 310 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 RAD9BQ6WBX8 426 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 TRIM74Q86UV6 250 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 ZC3H18Q86VM9 953 aaKnown RBP17.61■□□□□ 0.41
TPM4-206ENST00000587201 NRROSQ86YC3 692 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 SFTPA2Q8IWL1 248 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 KIAA1524Q8TCG1 905 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 GPBAR1Q8TDU6 330 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 PTCD2Q8WV60 388 aaKnown RBP17.61■□□□□ 0.41
TPM4-206ENST00000587201 KRT35Q92764 455 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 FGF11Q92914 225 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 GRAMD1AQ96CP6 724 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 HIC2Q96JB3 615 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 POLR1BQ9H9Y6 1135 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 ENTPD2Q9Y5L3 495 aa17.61■□□□□ 0.41
TPM4-206ENST00000587201 CELSR3Q9NYQ7 3312 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 RP1P56715 2156 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 URB1O60287 2271 aaKnown RBP17.6■□□□□ 0.41
TPM4-206ENST00000587201 CFAP47Q6ZTR5 3102 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 A0A087WV48 116 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 NTN3O00634 580 aaPredicted RBP17.6■□□□□ 0.41
TPM4-206ENST00000587201 ASMTLO95671 621 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 MT-CYBP00156 380 aaPredicted RBP17.6■□□□□ 0.41
TPM4-206ENST00000587201 RPLP0P05388 317 aaKnown RBP17.6■□□□□ 0.41
TPM4-206ENST00000587201 GLB1P16278 677 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 AK4P27144 223 aaPredicted RBP17.6■□□□□ 0.41
TPM4-206ENST00000587201 LSSP48449 732 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 SPINT3P49223 89 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 CCL7P80098 99 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 SLC14A2Q15849 920 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 TBC1D25Q3MII6 688 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 C3orf38Q5JPI3 329 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 SLC30A9Q6PML9 568 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 LRRC69Q6ZNQ3 347 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 MARK2Q7KZI7 788 aaKnown RBP17.6■□□□□ 0.41
TPM4-206ENST00000587201 LYSMD3Q7Z3D4 306 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 LSMEM2Q8N112 164 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 Q8N9G6 341 aaPredicted RBP17.6■□□□□ 0.41
TPM4-206ENST00000587201 SPATA22Q8NHS9 363 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 ZDHHC1Q8WTX9 485 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 ATXN7L3BQ96GX2 97 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 CALR3Q96L12 384 aaKnown RBP17.6■□□□□ 0.41
TPM4-206ENST00000587201 TEKT5Q96M29 485 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 GFM1Q96RP9 751 aaKnown RBP17.6■□□□□ 0.41
TPM4-206ENST00000587201 TRIB3Q96RU7 358 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 CDH19Q9H159 772 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 FAM83DQ9H4H8 585 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 ZFYVE1Q9HBF4 777 aa17.6■□□□□ 0.41
TPM4-206ENST00000587201 SPATS2LQ9NUQ6 558 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms