RNA–Protein interactions for RNA: ENST00000585867.2

RBFOX1-222, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-222ENST00000585867 TPMTP51580 245 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 POLR2LP62875 67 aaKnown RBP17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 DMWDQ09019 674 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 NEPROQ6NW34 567 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 FBXL19Q6PCT2 694 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 BRAT1Q6PJG6 821 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 ERN2Q76MJ5 926 aaKnown RBP17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 PARS2Q7L3T8 475 aaKnown RBP17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 STRA8Q7Z7C7 330 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 TTC7BQ86TV6 843 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 ZSWIM9Q86XI8 627 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 OR13J1Q8NGT2 312 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 SCG3Q8WXD2 468 aaKnown RBP17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 RBBP8Q99708 897 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 LRFN3Q9BTN0 628 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 HDAC8Q9BY41 377 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 CD93Q9NPY3 652 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 IL1RAPL1Q9NZN1 696 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 SERGEFQ9UGK8 458 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 FBXO4Q9UKT5 387 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 ZNF711Q9Y462 761 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 SPO11Q9Y5K1 396 aa17.82■□□□□ 0.44
RBFOX1-222ENST00000585867 TSPAN11A1L157 253 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 TRIM49D1C9J1S8 452 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 UGT1A9O60656 530 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 FAM155BO75949 473 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 PIRTP0C851 137 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 TDGF1P13385 188 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 TIMP2P16035 220 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 PSMA3P25788 255 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 P2RY2P41231 377 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 NEK3P51956 506 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 ZNF140P52738 457 aaPredicted RBP17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 CCDC15Q0P6D6 951 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 TIFABQ6ZNK6 161 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 USP30Q70CQ3 517 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 USP45Q70EL2 814 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 GALNT7Q86SF2 657 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 FAM124AQ86V42 546 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 KBTBD6Q86V97 674 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 UGT1A7Q9HAW7 530 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 UGT1A10Q9HAW8 530 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 UGT1A8Q9HAW9 530 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 USP36Q9P275 1121 aaKnown RBP17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 PKP3Q9Y446 797 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 KMT2EQ8IZD2 1858 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 MUC3AQ02505 3323 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 ZDBF2Q9HCK1 2354 aa17.81■□□□□ 0.44
RBFOX1-222ENST00000585867 CACNA1IQ9P0X4 2223 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 CAPN8A6NHC0 703 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 PRPF4O43172 522 aaKnown RBP eCLIP17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 ZNF217O75362 1048 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 PRKCGP05129 697 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 XPAP23025 273 aaPredicted RBP17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 ARNTP27540 789 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 ABL2P42684 1182 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 FNTBP49356 437 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 ATP1A2P50993 1020 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 SLC18A1P54219 525 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 AFTPHQ6ULP2 937 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 OTUD6BQ8N6M0 293 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 C2CD4AQ8NCU7 369 aaPredicted RBP17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 OR6P1Q8NGX9 317 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 RLN3Q8WXF3 142 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 HDAC10Q969S8 669 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 DNAJC1Q96KC8 554 aaKnown RBP17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 AGAP2Q99490 1192 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 GPR63Q9BZJ6 419 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 KCNK9Q9NPC2 374 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 NKIRAS1Q9NYS0 192 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 CYP8B1Q9UNU6 501 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 PPIL1Q9Y3C6 166 aa17.8■□□□□ 0.44
RBFOX1-222ENST00000585867 CCDC163A0A0D9SF12 145 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 STX7O15400 261 aaKnown RBP17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 ITGA2BP08514 1039 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 ADRB3P13945 408 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 KRT4P19013 534 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 POLD2P49005 469 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 LIMK2P53671 638 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 GYS2P54840 703 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 ANGPT1Q15389 498 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 PIP5KL1Q5T9C9 394 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 AGBL4Q5VU57 503 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 ZNF470Q6ECI4 717 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 MRNIPQ6NTE8 343 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 TTC30BQ8N4P2 665 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 ACMSDQ8TDX5 336 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 LYSMD1Q96S90 227 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 RHOJQ9H4E5 214 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 FZD4Q9ULV1 537 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 PSAT1Q9Y617 370 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 A0A1W2PPM1 405 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 TMEM120BA0PK00 339 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 UPK3BL1B0FP48 263 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 UPK3BL2E5RIL1 263 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 GALR2O43603 387 aaPredicted RBP17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 CTPS1P17812 591 aa17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 OGNP20774 298 aaKnown RBP17.79■□□□□ 0.44
RBFOX1-222ENST00000585867 HMGCLP35914 325 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms