RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 SSUH2Q9Y2M2 353 aa23.19■■□□□ 1.3
LSM7-203ENST00000585409 GOLGA6L10A0A0M3HER8 536 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 TCRBV7S2A1N4TA0A589 114 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 TTC24A2A3L6 582 aaPredicted RBP23.18■■□□□ 1.3
LSM7-203ENST00000585409 A6NNZ2 444 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 AREL1O15033 823 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 LIASO43766 372 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 ANXA9O76027 345 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 DUSP3P51452 185 aaPredicted RBP23.18■■□□□ 1.3
LSM7-203ENST00000585409 NIPAL4Q0D2K0 466 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 SGCGQ13326 291 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 TAF1BQ53T94 588 aaPredicted RBP23.18■■□□□ 1.3
LSM7-203ENST00000585409 Q6ZSR6 202 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 DCP2Q8IU60 420 aaKnown RBP23.18■■□□□ 1.3
LSM7-203ENST00000585409 VOPP1Q96AW1 172 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 SPATA13Q96N96 652 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 DUSP23Q9BVJ7 150 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 PCDH9Q9HC56 1237 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 FAM153AQ9UHL3 310 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 R3HDM2Q9Y2K5 976 aaKnown RBP23.18■■□□□ 1.3
LSM7-203ENST00000585409 HS3ST3A1Q9Y663 406 aa23.18■■□□□ 1.3
LSM7-203ENST00000585409 C5orf60A6NFR6 353 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 J3QKU1 62 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 RIOK3O14730 519 aaKnown RBP23.17■■□□□ 1.3
LSM7-203ENST00000585409 NFKB1P19838 968 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 HNRNPKP61978 463 aaKnown RBP eCLIP23.17■■□□□ 1.32e-6■■■■□ 21.9
LSM7-203ENST00000585409 SKOR1P84550 965 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 TMEM52BQ4KMG9 183 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 ZNF542PQ5EBM4 170 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 ANKRD20A2Q5SQ80 823 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 ARHGAP40Q5TG30 622 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 ANKRD20A1Q5TYW2 823 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 ANKRD20A3Q5VUR7 823 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 DRICH1Q6PGQ1 229 aaPredicted RBP23.17■■□□□ 1.3
LSM7-203ENST00000585409 ARHGEF18Q6ZSZ5 1173 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 KCNE4Q8WWG9 221 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 BMFQ96LC9 184 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 SRPK1Q96SB4 655 aaKnown RBP23.17■■□□□ 1.3
LSM7-203ENST00000585409 RBM15Q96T37 977 aaKnown RBP eCLIP23.17■■□□□ 1.3
LSM7-203ENST00000585409 DPH1Q9BZG8 443 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 GBA3Q9H227 469 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 PCDH12Q9NPG4 1184 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 EVA1BQ9NVM1 165 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 DNAJC28Q9NX36 388 aa23.17■■□□□ 1.3
LSM7-203ENST00000585409 AAR2Q9Y312 384 aaKnown RBP23.17■■□□□ 1.3
LSM7-203ENST00000585409 ANKRD36A6QL64 1941 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 RP1P56715 2156 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 GEMP55040 296 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 MPP3Q13368 585 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 FGL2Q14314 439 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 FZD2Q14332 565 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 ISXQ2M1V0 245 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 P3H1Q32P28 736 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 KYAT3Q6YP21 454 aaKnown RBP23.16■■□□□ 1.3
LSM7-203ENST00000585409 PTAR1Q7Z6K3 402 aaPredicted RBP23.16■■□□□ 1.3
LSM7-203ENST00000585409 ZNF548Q8NEK5 533 aaPredicted RBP23.16■■□□□ 1.3
LSM7-203ENST00000585409 IFI44Q8TCB0 444 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 ACTRT1Q8TDG2 376 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 C1orf54Q8WWF1 131 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 ASB12Q8WXK4 309 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 ATG4AQ8WYN0 398 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 ABCG4Q9H172 646 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 THSD1Q9NS62 852 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 KCTD5Q9NXV2 234 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 DRG1Q9Y295 367 aaKnown RBP23.16■■□□□ 1.3
LSM7-203ENST00000585409 SAR1BQ9Y6B6 198 aa23.16■■□□□ 1.3
LSM7-203ENST00000585409 KIF26BQ2KJY2 2108 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 SPTY2D1-AS1A0A0U1RR47 76 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 A0A1W2PNU3 283 aaPredicted RBP23.15■■□□□ 1.3
LSM7-203ENST00000585409 FZD6O60353 706 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 TM7SF2O76062 418 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 CSF2P04141 144 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 NME1P15531 152 aaKnown RBP23.15■■□□□ 1.3
LSM7-203ENST00000585409 CDK18Q07002 472 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 PAPD7Q5XG87 772 aaKnown RBP23.15■■□□□ 1.3
LSM7-203ENST00000585409 ZCCHC8Q6NZY4 707 aaKnown RBP23.15■■□□□ 1.3
LSM7-203ENST00000585409 DPPA4Q7L190 304 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 CCDC89Q8N998 374 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 FAM71DQ8N9W8 422 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 MAPK15Q8TD08 544 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 TTC9Q92623 222 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 SCRN2Q96FV2 425 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 TMEM121Q9BTD3 319 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 SLC17A9Q9BYT1 436 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 SEMA4CQ9C0C4 833 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 CHKBQ9Y259 395 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 CSNK1G3Q9Y6M4 447 aa23.15■■□□□ 1.3
LSM7-203ENST00000585409 POM121BA6NF01 834 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 KLK10O43240 276 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 GCATO75600 419 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 TUBB4AP04350 444 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 MMP2P08253 660 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 CASQ1P31415 396 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 VIPR1P32241 457 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 MMP12P39900 470 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 ETF1P62495 437 aaKnown RBP23.14■■□□□ 1.29
LSM7-203ENST00000585409 VAC14Q08AM6 782 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 SNX1Q13596 522 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 ARHGEF7Q14155 803 aa23.14■■□□□ 1.29
LSM7-203ENST00000585409 OASLQ15646 514 aaKnown RBP23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms