RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 SLC22A9Q8IVM8 553 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 STAG3L4Q8TBR4 150 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 FAM45AQ8TCE6 357 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 PBXIP1Q96AQ6 731 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 PRPF18Q99633 342 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 ECSITQ9BQ95 431 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 MRPL9Q9BYD2 267 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 BATF3Q9NR55 127 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 POLR3BQ9NW08 1133 aaPredicted RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 DNAJC28Q9NX36 388 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 KLQ9UEF7 1012 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 URB1O60287 2271 aaKnown RBP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 UNCXA6NJT0 531 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 AZIN1O14977 448 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 SYN3O14994 580 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 INSIG1O15503 277 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 NBNO60934 754 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 TIPRLO75663 272 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 TMCC1O94876 653 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 HLA-DPA1P20036 260 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 NDST2P52849 883 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 GPR17Q13304 367 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 PARP15Q460N3 678 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 EPGNQ6UW88 154 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 STYXQ8WUJ0 223 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 VPS50Q96JG6 964 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 ZNF558Q96NG5 402 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.28□□□□□ -0.6
TOP3A-217ENST00000584582 PRKAG2Q9UGJ0 569 aa11.28□□□□□ -0.6
TOP3A-217ENST00000584582 A0A088AWK7 358 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 KANSL1LA0AUZ9 987 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 CCL16O15467 120 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 HOXA2O43364 376 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 E2F6O75461 281 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 SNRPB2P08579 225 aaKnown RBP11.27□□□□□ -0.6
TOP3A-217ENST00000584582 IL10RBQ08334 325 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 SERINC3Q13530 473 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 CBX2Q14781 532 aaPredicted RBP11.27□□□□□ -0.6
TOP3A-217ENST00000584582 HSF5Q4G112 596 aaPredicted RBP11.27□□□□□ -0.6
TOP3A-217ENST00000584582 THEMIS2Q5TEJ8 643 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 RALGPS2Q86X27 583 aaPredicted RBP11.27□□□□□ -0.6
TOP3A-217ENST00000584582 NRG4Q8WWG1 115 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 C19orf60Q96EN9 201 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 CIB1Q99828 191 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 NDUFAF1Q9Y375 327 aa11.27□□□□□ -0.6
TOP3A-217ENST00000584582 MAGEC1O60732 1142 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 MAPK10P53779 464 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 CDC16Q13042 620 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 ANO7Q6IWH7 933 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 RETSATQ6NUM9 610 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 SETD3Q86TU7 594 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-217ENST00000584582 ZNF296Q8WUU4 475 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-217ENST00000584582 ING5Q8WYH8 240 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 IMP4Q96G21 291 aaKnown RBP11.27□□□□□ -0.61
TOP3A-217ENST00000584582 ACTR8Q9H981 624 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 CLIC5Q9NZA1 410 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 SPO11Q9Y5K1 396 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 A0A0J9YYE9 177 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 OR4F21O95013 312 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 UGT2B4P06133 528 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 NCK1P16333 377 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 SLC6A4P31645 630 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 CSKP41240 450 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 HSPA7P48741 367 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 PFKPQ01813 784 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 MTX3Q5HYI7 312 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 TBCELQ5QJ74 424 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 C6orf52Q5T4I8 152 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 NAIF1Q69YI7 327 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-217ENST00000584582 LYSMD3Q7Z3D4 306 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 MFSD6LQ8IWD5 586 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 RP9Q8TA86 221 aaKnown RBP11.27□□□□□ -0.61
TOP3A-217ENST00000584582 BRSK1Q8TDC3 778 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 TWIST2Q8WVJ9 160 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 PPM1MQ96MI6 270 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 TSGA13Q96PP4 275 aa11.27□□□□□ -0.61
TOP3A-217ENST00000584582 MRPL17Q9NRX2 175 aaKnown RBP11.27□□□□□ -0.61
TOP3A-217ENST00000584582 PNMA8BQ9ULN7 279 aaPredicted RBP11.27□□□□□ -0.61
TOP3A-217ENST00000584582 RLFQ13129 1914 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 ARHGAP10A1A4S6 786 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 MAGEA13PA6NCF6 341 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 ZNF189O75820 626 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-217ENST00000584582 AOC1P19801 751 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 ITGALP20701 1170 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 EFNA1P20827 205 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-217ENST00000584582 RGS4P49798 205 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 KPNA1P52294 538 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-217ENST00000584582 YBEYP58557 167 aaPredicted RBP11.26□□□□□ -0.61
TOP3A-217ENST00000584582 KCTD11Q693B1 232 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 DENND5AQ6IQ26 1287 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 ZBTB49Q6ZSB9 765 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 CMTM8Q8IZV2 173 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 EEF1AKMT1Q8WVE0 214 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 LPGAT1Q92604 370 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 DCUN1D1Q96GG9 259 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 C8orf48Q96LL4 319 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 C17orf80Q9BSJ5 609 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 CERS4Q9HA82 394 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 ZDHHC4Q9NPG8 344 aa11.26□□□□□ -0.61
TOP3A-217ENST00000584582 SORCS3Q9UPU3 1222 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms