RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 CCHCR1Q8TD31 782 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 NAT6Q93015 286 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 NXPE2Q96DL1 559 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 TEKT5Q96M29 485 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 LYSMD1Q96S90 227 aa20.36■□□□□ 0.85
SS18-224ENST00000584083 RIOK2Q9BVS4 552 aaKnown RBP20.36■□□□□ 0.85
SS18-224ENST00000584083 CCDC66A2RUB6 948 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 TAF4O00268 1085 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 PMPCBO75439 489 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 CEACAM5P06731 702 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 POLD2P49005 469 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 KIF5AQ12840 1032 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 PERM1Q5SV97 790 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 CCDC70Q6NSX1 233 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 DOK6Q6PKX4 331 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 ADAMTSL4Q6UY14 1074 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 BBS12Q6ZW61 710 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 TXLNBQ8N3L3 684 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 KYQ8NBH2 561 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 DEPDC7Q96QD5 511 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 DESI2Q9BSY9 194 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 FRMD8Q9BZ67 464 aaPredicted RBP20.35■□□□□ 0.85
SS18-224ENST00000584083 KLHL8Q9P2G9 620 aaPredicted RBP20.35■□□□□ 0.85
SS18-224ENST00000584083 AK5Q9Y6K8 562 aa20.35■□□□□ 0.85
SS18-224ENST00000584083 MACROD2A1Z1Q3 448 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 GRID2IPA4D2P6 1211 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 H7C0C1 242 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 MT-CYBP00156 380 aaPredicted RBP20.34■□□□□ 0.85
SS18-224ENST00000584083 PYGLP06737 847 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 CTNNA2P26232 953 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 CETN2P41208 172 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 GNPDA1P46926 289 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 ATP5OP48047 213 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 SPINT3P49223 89 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 RWDD2BP57060 319 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 CDK18Q07002 472 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 WASHC5Q12768 1159 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 CDCP2Q5VXM1 449 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 LYSMD3Q7Z3D4 306 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 NLRP8Q86W28 1048 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 CCL4L1Q8NHW4 92 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 HIC2Q96JB3 615 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 TRIB3Q96RU7 358 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 AGAP2Q99490 1192 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 SYNDIG1Q9H7V2 258 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 UBP1Q9NZI7 540 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 PKD2L2Q9NZM6 624 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 DKK4Q9UBT3 224 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 ACACAQ13085 2346 aa20.34■□□□□ 0.85
SS18-224ENST00000584083 HACD1B0YJ81 288 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 INPP4BO15327 924 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 CSO75390 466 aaKnown RBP20.33■□□□□ 0.85
SS18-224ENST00000584083 SOD1P00441 154 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 SLC4A1P02730 911 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 PIRTP0C851 137 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 NFKB1P19838 968 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 SLC14A2Q15849 920 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 PID1Q7Z2X4 250 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 TRIM74Q86UV6 250 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 RAVER1Q8IY67 606 aaKnown RBP20.33■□□□□ 0.85
SS18-224ENST00000584083 LRRC57Q8N9N7 239 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 HTR3CQ8WXA8 447 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 TADA1Q96BN2 335 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 QKIQ96PU8 341 aaKnown RBP eCLIP20.33■□□□□ 0.853e-6■■■■□ 23
SS18-224ENST00000584083 CCDC3Q9BQI4 270 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 OSBPL8Q9BZF1 889 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 NRSN2Q9GZP1 204 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 DPEP2Q9H4A9 486 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 FAM83DQ9H4H8 585 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 ZFYVE1Q9HBF4 777 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 TRIM10Q9UDY6 481 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 AMFRQ9UKV5 643 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 SUFUQ9UMX1 484 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 SLC17A4Q9Y2C5 497 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 TMEM98Q9Y2Y6 226 aa20.33■□□□□ 0.85
SS18-224ENST00000584083 DMXL2Q8TDJ6 3036 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 B4DGG1 531 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 APOC4-APOC2K7ER74 178 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 ASMTLO95671 621 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 NDST3O95803 873 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 APOC2P02655 101 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 FUCA1P04066 466 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 CD68P34810 354 aaPredicted RBP20.32■□□□□ 0.84
SS18-224ENST00000584083 TNNT3P45378 269 aaPredicted RBP20.32■□□□□ 0.84
SS18-224ENST00000584083 ILF3Q12906 894 aaKnown RBP eCLIP20.32■□□□□ 0.84
SS18-224ENST00000584083 XRCC4Q13426 336 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 PEX26Q7Z412 305 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 ZNF567Q8N184 647 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 PTCD2Q8WV60 388 aaKnown RBP20.32■□□□□ 0.84
SS18-224ENST00000584083 VAT1Q99536 393 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 GSDMCQ9BYG8 508 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 GPR63Q9BZJ6 419 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 MAGEE1Q9HCI5 957 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 TRNAU1APQ9NX07 287 aaKnown RBP20.32■□□□□ 0.84
SS18-224ENST00000584083 FAM153AQ9UHL3 310 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 SHOC2Q9UQ13 582 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 EFR3BQ9Y2G0 817 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 GPSM3Q9Y4H4 160 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 PCDHB1Q9Y5F3 818 aa20.32■□□□□ 0.84
SS18-224ENST00000584083 APC2O95996 2303 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms