RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 PDFQ9HBH1 243 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 UBA2Q9UBT2 640 aaPredicted RBP20.52■□□□□ 0.88
SRSF1-206ENST00000583741 ATP8A1Q9Y2Q0 1164 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 PCDHA3Q9Y5H8 950 aa20.52■□□□□ 0.88
SRSF1-206ENST00000583741 C9orf172C9J069 976 aa20.51■□□□□ 0.87
SRSF1-206ENST00000583741 TERTO14746 1132 aaKnown RBP20.51■□□□□ 0.87
SRSF1-206ENST00000583741 CREB3O43889 395 aa20.51■□□□□ 0.87
SRSF1-206ENST00000583741 RGRP47804 291 aa20.51■□□□□ 0.87
SRSF1-206ENST00000583741 HLTFQ14527 1009 aaKnown RBP eCLIP20.51■□□□□ 0.87
SRSF1-206ENST00000583741 HADHQ16836 314 aaKnown RBP20.51■□□□□ 0.87
SRSF1-206ENST00000583741 ERAP2Q6P179 960 aa20.51■□□□□ 0.87
SRSF1-206ENST00000583741 TAF8Q7Z7C8 310 aa20.51■□□□□ 0.87
SRSF1-206ENST00000583741 TMEM168Q9H0V1 697 aa20.51■□□□□ 0.87
SRSF1-206ENST00000583741 WASH4PA8MWX3 477 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 B4DGG1 531 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 J3KR12 359 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 TCF4P15884 667 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 MIPP30301 263 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 CXCR5P32302 372 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 GJC1P36383 396 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 KIAA1024LP59773 190 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 CYP4F2P78329 520 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 SLC25A11Q02978 314 aaKnown RBP20.5■□□□□ 0.87
SRSF1-206ENST00000583741 RALGDSQ12967 914 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 C14orf28Q4W4Y0 310 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 MANEAQ5SRI9 462 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 LRRC38Q5VT99 294 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 SCYL2Q6P3W7 929 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 BRAT1Q6PJG6 821 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 XKR5Q6UX68 686 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 DTX1Q86Y01 620 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 OR56A4Q8NGH8 313 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 CCL4L1Q8NHW4 92 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 HTR3CQ8WXA8 447 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 ALG3Q92685 438 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 USP7Q93009 1102 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 ZNF641Q96N77 438 aaPredicted RBP20.5■□□□□ 0.87
SRSF1-206ENST00000583741 LRIT1Q9P2V4 623 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 PNLIPP16233 465 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 GM2AP17900 193 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 MAPK10P53779 464 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 RWDD2BP57060 319 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 TUBB2AQ13885 445 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 GRM3Q14832 879 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 CFAP58Q5T655 872 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 POLNQ7Z5Q5 900 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 PELI3Q8N2H9 469 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 TMEM159Q96B96 161 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 CMKLR1Q99788 373 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 TUBB2BQ9BVA1 445 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 CARD9Q9H257 536 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 SEMA6CQ9H3T2 930 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 LRRC19Q9H756 370 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 SEPT10Q9P0V9 454 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 CDC23Q9UJX2 597 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 FZD10Q9ULW2 581 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 MRFAP1Q9Y605 127 aa20.5■□□□□ 0.87
SRSF1-206ENST00000583741 DOPEY2Q9Y3R5 2298 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 PRPSAP2O60256 369 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 RECQL5O94762 991 aaPredicted RBP20.49■□□□□ 0.87
SRSF1-206ENST00000583741 KRT7P08729 469 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 C16orf72Q14CZ0 275 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 TBR1Q16650 682 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 PHF19Q5T6S3 580 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 COG1Q8WTW3 980 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 CELF6Q96J87 481 aaKnown RBP20.49■□□□□ 0.87
SRSF1-206ENST00000583741 PBKQ96KB5 322 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 LGR4Q9BXB1 951 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 DPEP2Q9H4A9 486 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 CATSPERBQ9H7T0 1116 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 ZWILCHQ9H900 591 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 RDH14Q9HBH5 336 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 PCSK1NQ9UHG2 260 aa20.49■□□□□ 0.87
SRSF1-206ENST00000583741 CACNB4O00305 520 aaPredicted RBP20.48■□□□□ 0.87
SRSF1-206ENST00000583741 CES2O00748 559 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 SUV39H1O43463 412 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 NUDT21O43809 227 aaKnown RBP20.48■□□□□ 0.87
SRSF1-206ENST00000583741 PRAMEF11O60813 436 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 IL1R2P27930 398 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 ARHGEF7Q14155 803 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 ZFYVE27Q5T4F4 411 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 TXNRD3NBQ6F5E7 133 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 LIPIQ6XZB0 460 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 ATG14Q6ZNE5 492 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 KATNAL2Q8IYT4 538 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 TSEN2Q8NCE0 465 aaKnown RBP20.48■□□□□ 0.87
SRSF1-206ENST00000583741 TUBGCP5Q96RT8 1024 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 CYP4F12Q9HCS2 524 aa20.48■□□□□ 0.87
SRSF1-206ENST00000583741 DDX56Q9NY93 547 aaKnown RBP20.48■□□□□ 0.87
SRSF1-206ENST00000583741 ZNF185O15231 689 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 FGF10O15520 208 aaPredicted RBP20.47■□□□□ 0.87
SRSF1-206ENST00000583741 TRIM23P36406 574 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 B4GALNT1Q00973 533 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 SMTNL2Q2TAL5 461 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 MAP9Q49MG5 647 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 SRLQ86TD4 932 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 ECHDC3Q96DC8 303 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 CAPZA3Q96KX2 299 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 PEBP4Q96S96 227 aa20.47■□□□□ 0.87
SRSF1-206ENST00000583741 SEMA3CQ99985 751 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms