RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 ITPKBP27987 946 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 ACOX1Q15067 660 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 IRF4Q15306 451 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 ZNF569Q5MCW4 686 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 CDCP2Q5VXM1 449 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 ITPRIPL1Q6GPH6 555 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 HSD11B1LQ7Z5J1 315 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 APOLD1Q96LR9 279 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 MLPHQ9BV36 600 aaPredicted RBP24.83■■□□□ 1.57
TSEN54-209ENST00000583454 GBA3Q9H227 469 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 KCTD5Q9NXV2 234 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 UBP1Q9NZI7 540 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 RSPH14Q9UHP6 348 aa24.83■■□□□ 1.57
TSEN54-209ENST00000583454 HELZ2Q9BYK8 2649 aaKnown RBP24.83■■□□□ 1.57
TSEN54-209ENST00000583454 LOC285095A0A1B0GVY8 99 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 USP27XA6NNY8 438 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 SCAMP1O15126 338 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 KIF5CO60282 957 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 NDST3O95803 873 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 EPOP01588 193 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 CSF2P04141 144 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 NME1P15531 152 aaKnown RBP24.82■■□□□ 1.56
TSEN54-209ENST00000583454 ZNF30P17039 623 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 YPEL5P62699 121 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 DAB2P98082 770 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 E2F1Q01094 437 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 PTSQ03393 145 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 ARHGEF7Q14155 803 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 SIX1Q15475 284 aaPredicted RBP24.82■■□□□ 1.56
TSEN54-209ENST00000583454 PCSK7Q16549 785 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 CDKN3Q16667 212 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 FAM181AQ8N9Y4 354 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 SNIP1Q8TAD8 396 aaKnown RBP24.82■■□□□ 1.56
TSEN54-209ENST00000583454 ATG4AQ8WYN0 398 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 SPATA13Q96N96 652 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 DNAJC28Q9NX36 388 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 AK5Q9Y6K8 562 aa24.82■■□□□ 1.56
TSEN54-209ENST00000583454 LRP4O75096 1905 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 K7ESM1 405 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 LIASO43766 372 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 MT-CO3P00414 261 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 ABCG1P45844 678 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 WNT3AP56704 352 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 MPP3Q13368 585 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 GALNT3Q14435 633 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 OASLQ15646 514 aaKnown RBP24.81■■□□□ 1.56
TSEN54-209ENST00000583454 LRRC66Q68CR7 880 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 KDELC2Q7Z4H8 507 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 TECPR1Q7Z6L1 1165 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 RAVER1Q8IY67 606 aaKnown RBP24.81■■□□□ 1.56
TSEN54-209ENST00000583454 SLC35F6Q8N357 371 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 FAM71DQ8N9W8 422 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 ZNF548Q8NEK5 533 aaPredicted RBP24.81■■□□□ 1.56
TSEN54-209ENST00000583454 CCDC110Q8TBZ0 833 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 DTD2Q96FN9 168 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 MRGPRX2Q96LB1 330 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 GORASP1Q9BQQ3 440 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 PCDHB1Q9Y5F3 818 aa24.81■■□□□ 1.56
TSEN54-209ENST00000583454 A0A0U1RQS6 177 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 CEP104O60308 925 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 OPA1O60313 960 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 BRINP1O60477 761 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 GCATO75600 419 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 FGGP02679 453 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 CXCR5P32302 372 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 ETV3P41162 512 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 STC1P52823 247 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 HNRNPKP61978 463 aaKnown RBP eCLIP24.8■■□□□ 1.56
TSEN54-209ENST00000583454 MTM1Q13496 603 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 PARGQ86W56 976 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 RTP4Q96DX8 246 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 TMEM121Q9BTD3 319 aa24.8■■□□□ 1.56
TSEN54-209ENST00000583454 PNMA8BQ9ULN7 279 aaPredicted RBP24.8■■□□□ 1.56
TSEN54-209ENST00000583454 F5H423 210 aaPredicted RBP24.79■■□□□ 1.56
TSEN54-209ENST00000583454 ANXA9O76027 345 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 MSNP26038 577 aaKnown RBP24.79■■□□□ 1.56
TSEN54-209ENST00000583454 STIP1P31948 543 aaKnown RBP24.79■■□□□ 1.56
TSEN54-209ENST00000583454 EIF2B5Q13144 721 aaKnown RBP24.79■■□□□ 1.56
TSEN54-209ENST00000583454 INPP5AQ14642 412 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 DENND2CQ68D51 928 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 CCDC70Q6NSX1 233 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 ESRP1Q6NXG1 681 aaKnown RBP24.79■■□□□ 1.56
TSEN54-209ENST00000583454 Q6ZVL8 140 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 KLHDC8BQ8IXV7 354 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 PLA2G15Q8NCC3 412 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 MAIP1Q8WWC4 291 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 C1orf54Q8WWF1 131 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 NUS1Q96E22 293 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 PBKQ96KB5 322 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 MAGEE1Q9HCI5 957 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 ZKSCAN5Q9Y2L8 839 aa24.79■■□□□ 1.56
TSEN54-209ENST00000583454 CLDN7O95471 211 aa24.78■■□□□ 1.56
TSEN54-209ENST00000583454 GP1BAP07359 652 aa24.78■■□□□ 1.56
TSEN54-209ENST00000583454 ALPPL2P10696 532 aa24.78■■□□□ 1.56
TSEN54-209ENST00000583454 PSMB4P28070 264 aa24.78■■□□□ 1.56
TSEN54-209ENST00000583454 TRIM23P36406 574 aa24.78■■□□□ 1.56
TSEN54-209ENST00000583454 GEMP55040 296 aa24.78■■□□□ 1.56
TSEN54-209ENST00000583454 GDF10P55107 478 aa24.78■■□□□ 1.56
TSEN54-209ENST00000583454 PDE1CQ14123 709 aaPredicted RBP24.78■■□□□ 1.56
TSEN54-209ENST00000583454 CCNG2Q16589 344 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms