RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 KDM4CQ9H3R0 1056 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 VPS37BQ9H9H4 285 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SGK2Q9HBY8 427 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CD93Q9NPY3 652 aa16.32■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TCRBV9S1A1TA0A576 114 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 H7C0S8 307 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 DYNC1I1O14576 645 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZNF217O75362 1048 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PCDH8O95206 1070 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ELFN1P0C7U0 828 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PAMP19021 973 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ARNTP27540 789 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 OXTRP30559 389 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PHBP35232 272 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 HADHAP40939 763 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 XIAPP98170 497 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CSTF1Q05048 431 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 LONRF1Q17RB8 773 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RSPO4Q2I0M5 234 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NEK5Q6P3R8 708 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TRMT10BQ6PF06 316 aaKnown RBP16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FAM124AQ86V42 546 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NRSN1Q8IZ57 195 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 UNC5BQ8IZJ1 945 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FBF1Q8TES7 1133 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SUDS3Q9H7L9 328 aaPredicted RBP16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PREBQ9HCU5 417 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PKD2L2Q9NZM6 624 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FKBPLQ9UIM3 349 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RABGEF1Q9UJ41 708 aa16.31■□□□□ 0.2
CDK5RAP3-228ENST00000583363 A0A087WUV0 522 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CCDC162PA2VCL2 907 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CCL22O00626 93 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 VAPBO95292 243 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 C1QAP02745 245 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 HOXA6P31267 233 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ACSL1P33121 698 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ACOX1Q15067 660 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZDHHC20Q5W0Z9 365 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZNF449Q6P9G9 518 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 Q6ZVL8 140 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CYP2U1Q7Z449 544 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZBTB44Q8NCP5 570 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 GPR26Q8NDV2 337 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 OR6P1Q8NGX9 317 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 UHMK1Q8TAS1 419 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CERS2Q96G23 380 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SGSM3Q96HU1 749 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 BTBD1Q9H0C5 482 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 IL26Q9NPH9 171 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RAD18Q9NS91 495 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 C20orf96Q9NUD7 363 aaPredicted RBP16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NCDNQ9UBB6 729 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ZFR2Q9UPR6 939 aaKnown RBP16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PCDHGA2Q9Y5H1 932 aa16.3■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3DA0A087WVF3 549 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3IA0A087WXS9 549 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3EA0A087X179 549 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3KA0A087X1G2 549 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3FA6NER0 549 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 IGLON5A6NGN9 336 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 GOLGA8CPA6NN73 597 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 C10orf142B7Z368 130 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3LB9A6J9 549 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 WNT9AO14904 365 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 LZTS3O60299 673 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RNGTTO60942 597 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TM7SF2O76062 418 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RECQL5O94762 991 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 GOT2P00505 430 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3HP0C7X1 549 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ERVK-10P10266 1014 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 C6P13671 934 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 STX2P32856 288 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SPAM1P38567 509 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ETV3P41162 512 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PXNP49023 591 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 RPS21P63220 83 aaKnown RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PRAMEP78395 509 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 MGAT5Q09328 741 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PEX6Q13608 980 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 MAP7D1Q3KQU3 841 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PDPK2PQ6A1A2 396 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3GQ6DHY5 549 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3CQ6IPX1 549 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 KIAA1161Q6NSJ0 714 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TSSK4Q6SA08 328 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NLRP8Q86W28 1048 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 TBC1D3Q8IZP1 549 aaPredicted RBP16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 IQCKQ8N0W5 287 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 OR2T34Q8NGX1 318 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 OR4L1Q8NH43 312 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 DTX3LQ8TDB6 740 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 NELL1Q92832 810 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 DTD2Q96FN9 168 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 PLEKHG4BQ96PX9 1271 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 CDH19Q9H159 772 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 ABCG8Q9H221 673 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 FAM83DQ9H4H8 585 aa16.29■□□□□ 0.2
CDK5RAP3-228ENST00000583363 SMYD2Q9NRG4 433 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms