RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 LRRC19Q9H756 370 aa9.75□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PCDH12Q9NPG4 1184 aa9.75□□□□□ -0.85
CDK5RAP3-227ENST00000583352 UBA2Q9UBT2 640 aaPredicted RBP9.75□□□□□ -0.85
CDK5RAP3-227ENST00000583352 RABGEF1Q9UJ41 708 aa9.75□□□□□ -0.85
CDK5RAP3-227ENST00000583352 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.75□□□□□ -0.85
CDK5RAP3-227ENST00000583352 LAMA5O15230 3695 aa9.75□□□□□ -0.85
CDK5RAP3-227ENST00000583352 NBEAQ8NFP9 2946 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 COL6A6A6NMZ7 2263 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 A0A1W2PQM1 296 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FAM187AA6NFU0 413 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 WASH4PA8MWX3 477 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FGF10O15520 208 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PCCBP05166 539 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 JMJD7P0C870 316 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PSMA2P25787 234 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CCKBRP32239 447 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 COILP38432 576 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CARSP49589 748 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ZNF143P52747 638 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 AIF1P55008 147 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 DRG2P55039 364 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 GUCY2DQ02846 1103 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 MTM1Q13496 603 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 AGERQ15109 404 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CYTH1Q15438 398 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TAZQ16635 292 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TXNRD3NBQ6F5E7 133 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TTC27Q6P3X3 843 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 BRAT1Q6PJG6 821 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 USP53Q70EK8 1073 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HDXQ7Z353 690 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CCNJLQ8IV13 435 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 UMODL1-AS1Q8N2C9 162 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 MAGOHBQ96A72 148 aaKnown RBP9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ZNF641Q96N77 438 aaPredicted RBP9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FOXP3Q9BZS1 431 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CLMPQ9H6B4 373 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 OGFRQ9NZT2 677 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PISDQ9UG56 409 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PCYOX1Q9UHG3 505 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 AMACRQ9UHK6 382 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ACSL6Q9UKU0 697 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FZD10Q9ULW2 581 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ATP8A1Q9Y2Q0 1164 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 LOXL2Q9Y4K0 774 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 OR1A2Q9Y585 309 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 DGKBQ9Y6T7 804 aa9.74□□□□□ -0.85
CDK5RAP3-227ENST00000583352 C3orf70A6NLC5 250 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CACNB4O00305 520 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TTI1O43156 1089 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PHF2O75151 1096 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HEXIM1O94992 359 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 LIPCP11150 499 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HGFP14210 728 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 DESP17661 470 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 KELP23276 732 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 IL1R2P27930 398 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PTPN7P35236 360 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PCK1P35558 622 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 MMP12P39900 470 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 LIG3P49916 1009 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 KIAA1024LP59773 190 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TPI1P60174 286 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 COPS2P61201 443 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 KCNC4Q03721 635 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 KLF1Q13351 362 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 DUPD1Q68J44 220 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 XKR5Q6UX68 686 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PRICKLE2Q7Z3G6 844 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 POLNQ7Z5Q5 900 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TAF8Q7Z7C8 310 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CAMK1DQ8IU85 385 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PAF1Q8N7H5 531 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 Q8N9G6 341 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 GPR156Q8NFN8 814 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 MAIP1Q8WWC4 291 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 RAPGEF5Q92565 580 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TMEM159Q96B96 161 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 SGF29Q96ES7 293 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PDXPQ96GD0 296 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 TUBGCP5Q96RT8 1024 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 RBM15Q96T37 977 aaKnown RBP eCLIP9.73□□□□□ -0.853e-8■■□□□ 11.8
CDK5RAP3-227ENST00000583352 ARHGAP9Q9BRR9 750 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CNPY3Q9BT09 278 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 OSBPL8Q9BZF1 889 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 FAM117AQ9C073 453 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 DDX56Q9NY93 547 aaKnown RBP9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 DONSONQ9NYP3 566 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 SEPT10Q9P0V9 454 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 APPL1Q9UKG1 709 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 HEMK1Q9Y5R4 338 aaPredicted RBP9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 LRP4O75096 1905 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CELSR3Q9NYQ7 3312 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 LRRK1Q38SD2 2015 aa9.73□□□□□ -0.85
CDK5RAP3-227ENST00000583352 GOLGA6L10A0A0M3HER8 536 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 CFAP69A5D8W1 941 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 ARHGAP42A6NI28 874 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 PYCARD-AS1I3L0S3 204 aa9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 NVLO15381 856 aaKnown RBP9.72□□□□□ -0.85
CDK5RAP3-227ENST00000583352 EFSO43281 561 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms