RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 C1orf21Q9H246 121 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 TCF7L2Q9NQB0 619 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 TAS2R13Q9NYV9 303 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 PKP3Q9Y446 797 aa22.61■■□□□ 1.21
CCDC47-204ENST00000582252 FZD6O60353 706 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 ABL2P42684 1182 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 UBAP2LQ14157 1087 aaKnown RBP22.6■■□□□ 1.21
CCDC47-204ENST00000582252 LRIT3Q3SXY7 679 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 ARHGAP15Q53QZ3 475 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 SGF29Q96ES7 293 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 C19orf43Q9BQ61 176 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 UNKQ9C0B0 810 aaKnown RBP22.6■■□□□ 1.21
CCDC47-204ENST00000582252 ZNF576Q9H609 170 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 NSUN3Q9H649 340 aaKnown RBP22.6■■□□□ 1.21
CCDC47-204ENST00000582252 MAGEE1Q9HCI5 957 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 DZANK1Q9NVP4 752 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 POLR3BQ9NW08 1133 aaPredicted RBP22.6■■□□□ 1.21
CCDC47-204ENST00000582252 HCFC1R1Q9NWW0 138 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 COMMD10Q9Y6G5 202 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 A8MT66 165 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 SRP72O76094 671 aaKnown RBP22.6■■□□□ 1.21
CCDC47-204ENST00000582252 RHOBTB1O94844 696 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 IGSF6O95976 241 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 PYGLP06737 847 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 RHOP08100 348 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 NCF2P19878 526 aaPredicted RBP22.6■■□□□ 1.21
CCDC47-204ENST00000582252 PRDX6P30041 224 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 MXRA7P84157 204 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 BCL2L1Q07817 233 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 GALNT1Q10472 559 aaPredicted RBP22.6■■□□□ 1.21
CCDC47-204ENST00000582252 KCNC3Q14003 757 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 VWA5B1Q5TIE3 1220 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 APCDD1Q8J025 514 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 TTC30BQ8N4P2 665 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 ZNF557Q8N988 423 aaPredicted RBP22.6■■□□□ 1.21
CCDC47-204ENST00000582252 ANKRD49Q8WVL7 239 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 BHMTQ93088 406 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.6■■□□□ 1.21
CCDC47-204ENST00000582252 TRMOQ9BU70 441 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 CCDC28BQ9BUN5 200 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 SFXN1Q9H9B4 322 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 ABCB8Q9NUT2 735 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 CDYLQ9Y232 598 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 PCDHB9Q9Y5E1 797 aa22.6■■□□□ 1.21
CCDC47-204ENST00000582252 TRPC5OSA6NMA1 111 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 A8MUI8 341 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 SOCS5O75159 536 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 PGLSO95336 258 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 PAPLNO95428 1278 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 ZNF37AP17032 561 aaPredicted RBP22.59■■□□□ 1.21
CCDC47-204ENST00000582252 MC4RP32245 332 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 PLK1P53350 603 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 NFKB2Q00653 900 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 KDSRQ06136 332 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 LMAN2Q12907 356 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 ZNF697Q5TEC3 545 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 LSMEM2Q8N112 164 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 STK40Q8N2I9 435 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 RHEBL1Q8TAI7 183 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 AGR3Q8TD06 166 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 LPGAT1Q92604 370 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 ZNF707Q96C28 371 aaPredicted RBP22.59■■□□□ 1.21
CCDC47-204ENST00000582252 SLC46A2Q9BY10 475 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 GPR63Q9BZJ6 419 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 ALG9Q9H6U8 611 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 ZDHHC2Q9UIJ5 367 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 ZNF711Q9Y462 761 aa22.59■■□□□ 1.21
CCDC47-204ENST00000582252 SOBPA7XYQ1 873 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 LMNAP02545 664 aaKnown RBP22.58■■□□□ 1.21
CCDC47-204ENST00000582252 TPBGLP0DKB5 382 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 EZRP15311 586 aaKnown RBP22.58■■□□□ 1.21
CCDC47-204ENST00000582252 CD1DP15813 335 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 PLEKHG6Q3KR16 790 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 SLC9B1Q4ZJI4 515 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 ATXN7L2Q5T6C5 722 aaPredicted RBP22.58■■□□□ 1.21
CCDC47-204ENST00000582252 TMEM207Q6UWW9 146 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 TPGS1Q6ZTW0 290 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 RAB44Q7Z6P3 723 aaPredicted RBP22.58■■□□□ 1.21
CCDC47-204ENST00000582252 PIM3Q86V86 326 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 PAF1Q8N7H5 531 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 SHKBP1Q8TBC3 707 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 TFB2MQ9H5Q4 396 aaKnown RBP22.58■■□□□ 1.21
CCDC47-204ENST00000582252 MRGBPQ9NV56 204 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 FKBPLQ9UIM3 349 aa22.58■■□□□ 1.21
CCDC47-204ENST00000582252 GOLGA8QA0A0J9YX86 632 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 GOLGA8OA6NCC3 632 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 GOLGA8CPA6NN73 597 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 GOLGA8NF8WBI6 632 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 SLC22A2O15244 555 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 MAGEC1O60732 1142 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 GJA1P17302 382 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 CD9P21926 228 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 PPARGP37231 505 aaPredicted RBP22.57■■□□□ 1.2
CCDC47-204ENST00000582252 CPA2P48052 419 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 ATP6V0D1P61421 351 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 MLLT1Q03111 559 aaPredicted RBP22.57■■□□□ 1.2
CCDC47-204ENST00000582252 ZRANB3Q5FWF4 1079 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 ISCA2Q86U28 154 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 SH3RF2Q8TEC5 729 aa22.57■■□□□ 1.2
CCDC47-204ENST00000582252 TM6SF2Q9BZW4 377 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms