RNA–Protein interactions for RNA: ENST00000580751.5

SS18-216, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-216ENST00000580751 CD38P28907 300 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 NPY2RP49146 381 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 PTSQ03393 145 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 CDH17Q12864 832 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 OVGP1Q12889 678 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 OLIG2Q13516 323 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 PLA2G2CQ5R387 149 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 ANKRD22Q5VYY1 191 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 LYSMD3Q7Z3D4 306 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 GLT6D1Q7Z4J2 308 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 HSD11B1LQ7Z5J1 315 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 TMC3Q7Z5M5 1100 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 IQCHQ86VS3 1027 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 CBARPQ8N350 705 aaPredicted RBP15.49■□□□□ 0.07
SS18-216ENST00000580751 BLOC1S5Q8TDH9 187 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 DTD2Q96FN9 168 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 SERPINB12Q96P63 405 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 KLF6Q99612 283 aaPredicted RBP15.49■□□□□ 0.07
SS18-216ENST00000580751 MYOCQ99972 504 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 FZD3Q9NPG1 666 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 RAD18Q9NS91 495 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 PKD2L2Q9NZM6 624 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 SPO11Q9Y5K1 396 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 HS3ST3A1Q9Y663 406 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 SLCO1B1Q9Y6L6 691 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 LRRK1Q38SD2 2015 aa15.49■□□□□ 0.07
SS18-216ENST00000580751 TCRBV7S3A2A0A539 114 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 A6NNZ2 444 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 TOR1BO14657 336 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 KHNYNO15037 678 aaKnown RBP15.48■□□□□ 0.07
SS18-216ENST00000580751 RAD51BO15315 384 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 FOXD2O60548 495 aaPredicted RBP15.48■□□□□ 0.07
SS18-216ENST00000580751 MAGEC1O60732 1142 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 SPAG6O75602 509 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 SLC4A1P02730 911 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 C1SP09871 688 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 GM2AP17900 193 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 HMGCLP35914 325 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 ETV3P41162 512 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 DHX9Q08211 1270 aaKnown RBP15.48■□□□□ 0.07
SS18-216ENST00000580751 IRF4Q15306 451 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 WSCD2Q2TBF2 565 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 TRIM61Q5EBN2 209 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 DENND5AQ6IQ26 1287 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 SLC23A3Q6PIS1 610 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 KYAT3Q6YP21 454 aaKnown RBP15.48■□□□□ 0.07
SS18-216ENST00000580751 GCNT7Q6ZNI0 430 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 Q6ZVL8 140 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 ZNF765Q7L2R6 523 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 ASCL5Q7RTU5 278 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 ABI3BPQ7Z7G0 1075 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 NRSN1Q8IZ57 195 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 CNPY4Q8N129 248 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 DNAAF3Q8N9W5 541 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 MFSD2AQ8NA29 543 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 TP53I13Q8NBR0 393 aaPredicted RBP15.48■□□□□ 0.07
SS18-216ENST00000580751 CENPTQ96BT3 561 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 CDH19Q9H159 772 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 VIPAS39Q9H9C1 493 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 CASS4Q9NQ75 786 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 SLC6A14Q9UN76 642 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 DOCK9Q9BZ29 2069 aa15.48■□□□□ 0.07
SS18-216ENST00000580751 PI4KAP42356 2102 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 A0A0U1RQS6 177 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 A0A1W2PR77 199 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 SDR42E2A6NKP2 422 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 VILLO15195 856 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 CRTAMO95727 393 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 GSTA2P09210 222 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 FAM153BP0C7A2 387 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 ZNF806P0C7X5 589 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 IGFALSP35858 605 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 PMS2P54278 862 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 C21orf59P57076 290 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 PDE1BQ01064 536 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 SPEM2Q0P670 501 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 MTM1Q13496 603 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 LAMB3Q13751 1172 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 TAF1AQ15573 450 aaPredicted RBP15.47■□□□□ 0.07
SS18-216ENST00000580751 CSRP2Q16527 193 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 FAM153CQ494X1 144 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 ESRP1Q6NXG1 681 aaKnown RBP15.47■□□□□ 0.07
SS18-216ENST00000580751 HDXQ7Z353 690 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 TECPR1Q7Z6L1 1165 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 CAND1Q86VP6 1230 aaKnown RBP15.47■□□□□ 0.07
SS18-216ENST00000580751 BRSK1Q8TDC3 778 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 PTCD2Q8WV60 388 aaKnown RBP15.47■□□□□ 0.07
SS18-216ENST00000580751 NUSAP1Q9BXS6 441 aaKnown RBP15.47■□□□□ 0.07
SS18-216ENST00000580751 CAPN10Q9HC96 672 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.47■□□□□ 0.07
SS18-216ENST00000580751 BFARQ9NZS9 450 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 NFKBIL1Q9UBC1 381 aaPredicted RBP15.47■□□□□ 0.07
SS18-216ENST00000580751 CA5BQ9Y2D0 317 aa15.47■□□□□ 0.07
SS18-216ENST00000580751 C2orf81A6NN90 581 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 PATE3B3GLJ2 98 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 PCCBP05166 539 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 PYGLP06737 847 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 SYPP08247 313 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 MAGEA4P43358 317 aa15.46■□□□□ 0.07
SS18-216ENST00000580751 RABIFP47224 123 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms