RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	ASS1	P00966	412 aa	Known RBP	5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	LTF	P02788	710 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	LCP1	P13796	627 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	CES1	P23141	567 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	RRM1	P23921	792 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	CSF2RB	P32927	897 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	ADRA1B	P35368	520 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	LONP1	P36776	959 aa	Known RBP	5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	PIK3CA	P42336	1068 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	RRAD	P55042	308 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	DAOA	P59103	153 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	BST2	Q10589	180 aa	Known RBP	5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	INPP5A	Q14642	412 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	IRF4	Q15306	451 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	ASIC2	Q16515	512 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	HGSNAT	Q68CP4	663 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	ARHGAP17	Q68EM7	881 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	CXorf57	Q6NSI4	855 aa	Known RBP	5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	MTFR2	Q6P444	385 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	C22orf39	Q6P5X5	142 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	XKRX	Q6PP77	449 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZNF517	Q6ZMY9	492 aa	Predicted RBP	5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	TTC7B	Q86TV6	843 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	BIVM	Q86UB2	503 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	SCML4	Q8N228	414 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	RYBP	Q8N488	228 aa	Predicted RBP	5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	OR56A4	Q8NGH8	313 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	PARD3B	Q8TEW8	1205 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	IRGQ	Q8WZA9	623 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	TM9SF4	Q92544	642 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	RELT	Q969Z4	430 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	DNAJC19	Q96DA6	116 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	PDXP	Q96GD0	296 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	RPRD1A	Q96P16	312 aa	Predicted RBP	5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	SLC38A3	Q99624	504 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	SMAD5	Q99717	465 aa	Known RBP	5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	GPR87	Q9BY21	358 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	GSDMC	Q9BYG8	508 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	FGFBP2	Q9BYJ0	223 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	TMEM168	Q9H0V1	697 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZDHHC6	Q9H6R6	413 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	AGPAT3	Q9NRZ7	376 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	SPATS2L	Q9NUQ6	558 aa	Known RBP	5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	PDP2	Q9P2J9	529 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	ADGRE2	Q9UHX3	823 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	LNPEP	Q9UIQ6	1025 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	ITM2B	Q9Y287	266 aa		5.99	□□□□□ -1.45
KPNB1-209	ENST00000580158	ACAN	P16112	2415 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	LRRIQ3	A6PVS8	624 aa	Predicted RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	KCNU1	A8MYU2	1149 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	RASA4B	C9J798	803 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158		K7ERQ8	282 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	PDE2A	O00408	941 aa	Predicted RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	TNFRSF10C	O14798	259 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	IKBKB	O14920	756 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	PPM1D	O15297	605 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	RASA4	O43374	803 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	SMAD6	O43541	496 aa	Known RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CLDN11	O75508	207 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	TMEM63A	O94886	807 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	NDUFA10	O95299	355 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	ALPP	P05187	535 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	FGF1	P05230	155 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CCNB1	P14635	433 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	PCSK2	P16519	638 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZNF28	P17035	718 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	BMP6	P22004	513 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	LPO	P22079	712 aa	Predicted RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	PTPN4	P29074	926 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	HNRNPH3	P31942	346 aa	Known RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CCNH	P51946	323 aa	Predicted RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	NDST2	P52849	883 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	HMGN5	P82970	282 aa	Known RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	ILF3	Q12906	894 aa	Known RBP eCLIP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZACN	Q401N2	412 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZNF805	Q5CZA5	627 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CARD16	Q5EG05	197 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	RRAGB	Q5VZM2	374 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	ANKRD40	Q6AI12	368 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CYB5D1	Q6P9G0	228 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	FOXR2	Q6PJQ5	311 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	WDR74	Q6RFH5	385 aa	Predicted RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	RPTN	Q6XPR3	784 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	MED25	Q71SY5	747 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	C17orf82	Q86X59	251 aa	Predicted RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CIR1	Q86X95	450 aa	Predicted RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	ZADH2	Q8N4Q0	377 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	PCDH20	Q8N6Y1	951 aa	Known RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	TMEM102	Q8N9M5	508 aa	Predicted RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CCL4L1	Q8NHW4	92 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CT55	Q8WUE5	264 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	SLC39A13	Q96H72	371 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	FOXC2	Q99958	501 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	OSBPL1A	Q9BXW6	950 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	BACH2	Q9BYV9	841 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	LHX9	Q9NQ69	397 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	ARHGEF38	Q9NXL2	777 aa		5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	CGN	Q9P2M7	1197 aa	Known RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	XPO7	Q9UIA9	1087 aa	Known RBP	5.98	□□□□□ -1.45
KPNB1-209	ENST00000580158	TSPAN16	Q9UKR8	245 aa		5.98	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms