RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 SNRNP25Q9BV90 132 aaKnown RBP13.37□□□□□ -0.27
TRAF4-214ENST00000580073 SLC39A8Q9C0K1 460 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 TMEM168Q9H0V1 697 aa13.37□□□□□ -0.27
TRAF4-214ENST00000580073 ZNF106Q9H2Y7 1883 aaKnown RBP13.37□□□□□ -0.27
TRAF4-214ENST00000580073 H3BRJ5 948 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 ERCC2P18074 760 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 ITIH1P19827 911 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 HCAR3P49019 387 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 TAS2R40P59535 323 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 SLC25A11Q02978 314 aaKnown RBP13.36□□□□□ -0.27
TRAF4-214ENST00000580073 LBRQ14739 615 aaKnown RBP13.36□□□□□ -0.27
TRAF4-214ENST00000580073 NR1D2Q14995 579 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 ATP13A4Q4VNC1 1196 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 USP45Q70EL2 814 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 ZNF438Q7Z4V0 828 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 HEATR4Q86WZ0 1026 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 ZSWIM9Q86XI8 627 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 USP7Q93009 1102 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 SEMA3CQ99985 751 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 ADNPQ9H2P0 1102 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 KCNF1Q9H3M0 494 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 GOLPH3Q9H4A6 298 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 MRPL40Q9NQ50 206 aaKnown RBP13.36□□□□□ -0.27
TRAF4-214ENST00000580073 UVRAGQ9P2Y5 699 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 B4GALT6Q9UBX8 382 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 TRIM10Q9UDY6 481 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 DNPEPQ9ULA0 475 aa13.36□□□□□ -0.27
TRAF4-214ENST00000580073 GOLGA6CA6NDK9 693 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 GOLGA6BA6NDN3 693 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 PJA2O43164 708 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 PROSCO94903 275 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 PRKCGP05129 697 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 GOLGA6DP0CG33 693 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 RGRP47804 291 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 RAB15P59190 212 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 PIGHQ14442 188 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-214ENST00000580073 MESDQ14696 234 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 RAET1GQ6H3X3 334 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 TMCO3Q6UWJ1 677 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 ATPAF2Q8N5M1 289 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 PDCD6IPQ8WUM4 868 aaKnown RBP13.35□□□□□ -0.27
TRAF4-214ENST00000580073 EXTL1Q92935 676 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 COQ10AQ96MF6 247 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 ZNF830Q96NB3 372 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-214ENST00000580073 NUDCD1Q96RS6 583 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 KCTD15Q96SI1 283 aaPredicted RBP13.35□□□□□ -0.27
TRAF4-214ENST00000580073 TEX101Q9BY14 249 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 STN1Q9H668 368 aaKnown RBP13.35□□□□□ -0.27
TRAF4-214ENST00000580073 STARD5Q9NSY2 213 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 GOLGA6AQ9NYA3 693 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 IP6K2Q9UHH9 426 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 PHTF1Q9UMS5 762 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 HYOU1Q9Y4L1 999 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 ADGRG1Q9Y653 693 aa13.35□□□□□ -0.27
TRAF4-214ENST00000580073 MYO1FO00160 1098 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 TRAFD1O14545 582 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-214ENST00000580073 CASC3O15234 703 aaKnown RBP13.34□□□□□ -0.27
TRAF4-214ENST00000580073 ARHGAP6O43182 974 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 HTRA2O43464 458 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-214ENST00000580073 HEXIM1O94992 359 aaKnown RBP13.34□□□□□ -0.27
TRAF4-214ENST00000580073 IVLP07476 585 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 RARAP10276 462 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 CA4P22748 312 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 PCK1P35558 622 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 NOP2P46087 812 aaKnown RBP13.34□□□□□ -0.27
TRAF4-214ENST00000580073 GNPDA1P46926 289 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 VAV2P52735 878 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 HADHBP55084 474 aaKnown RBP13.34□□□□□ -0.27
TRAF4-214ENST00000580073 CDH6P55285 790 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 GPLD1P80108 840 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 CDK3Q00526 305 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 SPA17Q15506 151 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 TGIF1Q15583 401 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 CNGA3Q16281 694 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 AMZ1Q400G9 498 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 DTX1Q86Y01 620 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 ARHGAP12Q8IWW6 846 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 IL22RA1Q8N6P7 574 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 AGBL5Q8NDL9 886 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 OR4D9Q8NGE8 314 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 DTD2Q96FN9 168 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 CATSPER2Q96P56 530 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 TAAR9Q96RI9 348 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 DDA1Q9BW61 102 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 FRMD8Q9BZ67 464 aaPredicted RBP13.34□□□□□ -0.27
TRAF4-214ENST00000580073 FOXJ2Q9P0K8 574 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 TAAR2Q9P1P5 351 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 PCDHGA3Q9Y5H0 932 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 TENM4Q6N022 2769 aa13.34□□□□□ -0.27
TRAF4-214ENST00000580073 PIEZO2Q9H5I5 2752 aa13.33□□□□□ -0.27
TRAF4-214ENST00000580073 C9orf172C9J069 976 aa13.33□□□□□ -0.28
TRAF4-214ENST00000580073 CAPN5O15484 640 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-214ENST00000580073 SLC2A4P14672 509 aa13.33□□□□□ -0.28
TRAF4-214ENST00000580073 ALDH4A1P30038 563 aa13.33□□□□□ -0.28
TRAF4-214ENST00000580073 CSTF2P33240 577 aaKnown RBP eCLIP13.33□□□□□ -0.28
TRAF4-214ENST00000580073 ARHGAP25P42331 645 aa13.33□□□□□ -0.28
TRAF4-214ENST00000580073 PPM1FP49593 454 aaPredicted RBP13.33□□□□□ -0.28
TRAF4-214ENST00000580073 ARSEP51690 589 aa13.33□□□□□ -0.28
TRAF4-214ENST00000580073 LIMK2P53671 638 aa13.33□□□□□ -0.28
TRAF4-214ENST00000580073 MAZP56270 477 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms