RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 CEACAM5P06731 702 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 IVLP07476 585 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 GOLGA6DP0CG33 693 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 MYF5P13349 255 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 SPINT3P49223 89 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 GSDMDP57764 484 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 WASHC5Q12768 1159 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 TARDBPQ13148 414 aaKnown RBP eCLIP14.79□□□□□ -0.042e-8■■□□□ 13.7
SS18-212ENST00000579061 NOMO1Q15155 1222 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 KCTD16Q68DU8 428 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 GUSBP11Q6P575 273 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 RFLNAQ6ZTI6 216 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 NYAP1Q6ZVC0 841 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 EFL1Q7Z2Z2 1120 aaKnown RBP14.79□□□□□ -0.04
SS18-212ENST00000579061 ZC3H18Q86VM9 953 aaKnown RBP14.79□□□□□ -0.04
SS18-212ENST00000579061 PROSER1Q86XN7 944 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 MARCH9Q86YJ5 346 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 ARL10Q8N8L6 244 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 OR6C4Q8NGE1 309 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 UBE2Q2Q8WVN8 375 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 SCARF2Q96GP6 870 aaPredicted RBP14.79□□□□□ -0.04
SS18-212ENST00000579061 OSBPL8Q9BZF1 889 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 NRSN2Q9GZP1 204 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 MAGEE1Q9HCI5 957 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 MRPL40Q9NQ50 206 aaKnown RBP14.79□□□□□ -0.04
SS18-212ENST00000579061 TRNAU1APQ9NX07 287 aaKnown RBP14.79□□□□□ -0.04
SS18-212ENST00000579061 GOLGA6AQ9NYA3 693 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 FAM153AQ9UHL3 310 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 AMFRQ9UKV5 643 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 PADI4Q9UM07 663 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 GPR34Q9UPC5 381 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 SLC17A4Q9Y2C5 497 aa14.79□□□□□ -0.04
SS18-212ENST00000579061 ANKRD11Q6UB99 2663 aaPredicted RBP14.78□□□□□ -0.04
SS18-212ENST00000579061 CPED1A4D0V7 1026 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 MIF4GDA9UHW6 222 aaKnown RBP14.78□□□□□ -0.04
SS18-212ENST00000579061 NDST3O95803 873 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 EPOP01588 193 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 CD68P34810 354 aaPredicted RBP14.78□□□□□ -0.04
SS18-212ENST00000579061 CLDN6P56747 220 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 RTP5Q14D33 572 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 CCDC181Q5TID7 509 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 CCDC70Q6NSX1 233 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 OGFOD3Q6PK18 319 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 B4GALNT4Q76KP1 1039 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 TAF8Q7Z7C8 310 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 MAPK15Q8TD08 544 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 HTR3CQ8WXA8 447 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 SCAMP4Q969E2 229 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 GRAMD1AQ96CP6 724 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 HAUS1Q96CS2 278 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 NXPE2Q96DL1 559 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 COX14Q96I36 57 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 DEPDC7Q96QD5 511 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 FCRL5Q96RD9 977 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 FERMT1Q9BQL6 677 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 HEMGNQ9BXL5 484 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 TMEM168Q9H0V1 697 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 CDH19Q9H159 772 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 ABCG4Q9H172 646 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 CARS2Q9HA77 564 aaKnown RBP14.78□□□□□ -0.04
SS18-212ENST00000579061 ZFYVE1Q9HBF4 777 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 RAD18Q9NS91 495 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 NFKBIL1Q9UBC1 381 aaPredicted RBP14.78□□□□□ -0.04
SS18-212ENST00000579061 CD84Q9UIB8 345 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 MOSPD1Q9UJG1 213 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 TRHDEQ9UKU6 1024 aa14.78□□□□□ -0.04
SS18-212ENST00000579061 COL27A1Q8IZC6 1860 aaPredicted RBP14.78□□□□□ -0.04
SS18-212ENST00000579061 UNC13CQ8NB66 2214 aa14.77□□□□□ -0.04
SS18-212ENST00000579061 WDFY3Q8IZQ1 3526 aa14.77□□□□□ -0.04
SS18-212ENST00000579061 ZNF189O75820 626 aaPredicted RBP14.77□□□□□ -0.05
SS18-212ENST00000579061 MT-CYBP00156 380 aaPredicted RBP14.77□□□□□ -0.05
SS18-212ENST00000579061 DCDC1P59894 354 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 PEX6Q13608 980 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 GALNT3Q14435 633 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 HENMT1Q5T8I9 393 aaKnown RBP14.77□□□□□ -0.05
SS18-212ENST00000579061 PID1Q7Z2X4 250 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 PEX26Q7Z412 305 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 ZNF567Q8N184 647 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 RNF10Q8N5U6 811 aaKnown RBP14.77□□□□□ -0.05
SS18-212ENST00000579061 UBL4BQ8N7F7 174 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 GPR156Q8NFN8 814 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 SPATA22Q8NHS9 363 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 MDM1Q8TC05 714 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 GPBAR1Q8TDU6 330 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 ALG3Q92685 438 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 HIC2Q96JB3 615 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 WDR24Q96S15 920 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 RIOK2Q9BVS4 552 aaKnown RBP14.77□□□□□ -0.05
SS18-212ENST00000579061 GSDMCQ9BYG8 508 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 FAM83DQ9H4H8 585 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 KLHL8Q9P2G9 620 aaPredicted RBP14.77□□□□□ -0.05
SS18-212ENST00000579061 GULP1Q9UBP9 304 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 SUFUQ9UMX1 484 aa14.77□□□□□ -0.05
SS18-212ENST00000579061 URB1O60287 2271 aaKnown RBP14.77□□□□□ -0.05
SS18-212ENST00000579061 ZZEF1O43149 2961 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 SCN8AQ9UQD0 1980 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 LOC285095A0A1B0GVY8 99 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 MACROD2A1Z1Q3 448 aa14.76□□□□□ -0.05
SS18-212ENST00000579061 SRRM3A6NNA2 597 aaPredicted RBP14.76□□□□□ -0.05
SS18-212ENST00000579061 H7C0C1 242 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms