RNA–Protein interactions for RNA: ENST00000579028.1

BRIP1-204, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

TSL 5

Gene BRIP1, Length 790 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-204ENST00000579028 TSEN2Q8NCE0 465 aaKnown RBP8.66□□□□□ -1.02
BRIP1-204ENST00000579028 JOSD2Q8TAC2 188 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 GPT2Q8TD30 523 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 CPA5Q8WXQ8 436 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 DTD2Q96FN9 168 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 OR2M4Q96R27 311 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 CATSPERBQ9H7T0 1116 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 CASS4Q9NQ75 786 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 B4GALT6Q9UBX8 382 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 CROTQ9UKG9 612 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 SRPK3Q9UPE1 567 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 PLEKHM1Q9Y4G2 1056 aa8.66□□□□□ -1.02
BRIP1-204ENST00000579028 OAS3Q9Y6K5 1087 aaKnown RBP8.66□□□□□ -1.02
BRIP1-204ENST00000579028 TNRC6AQ8NDV7 1962 aaKnown RBP8.66□□□□□ -1.02
BRIP1-204ENST00000579028 A8MX80 341 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 J3KR12 359 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 CREG1O75629 220 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 KRT38O76015 456 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 HEXIM1O94992 359 aaKnown RBP8.65□□□□□ -1.02
BRIP1-204ENST00000579028 MMEP08473 750 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 ZNF28P17035 718 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 ELAVL4P26378 380 aaKnown RBP8.65□□□□□ -1.02
BRIP1-204ENST00000579028 EPHA4P54764 986 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 HHEXQ03014 270 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 NSUN2Q08J23 767 aaKnown RBP eCLIP8.65□□□□□ -1.02
BRIP1-204ENST00000579028 SEMA5AQ13591 1074 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 NADK2Q4G0N4 442 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 PYCR3Q53H96 274 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 TAF3Q5VWG9 929 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 NAA35Q5VZE5 725 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 DPY19L2P1Q6NXN4 242 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 C6orf15Q6UXA7 325 aaPredicted RBP8.65□□□□□ -1.02
BRIP1-204ENST00000579028 SLFN11Q7Z7L1 901 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 NOP9Q86U38 636 aaKnown RBP8.65□□□□□ -1.02
BRIP1-204ENST00000579028 TMEM135Q86UB9 458 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 FAM172AQ8WUF8 416 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 NCSTNQ92542 709 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 NSMCE3Q96MG7 304 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 ULBP3Q9BZM4 244 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 LRRC19Q9H756 370 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 MLXIPLQ9NP71 852 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 SARS2Q9NP81 518 aaKnown RBP8.65□□□□□ -1.02
BRIP1-204ENST00000579028 RCOR3Q9P2K3 495 aaPredicted RBP8.65□□□□□ -1.02
BRIP1-204ENST00000579028 KCND3Q9UK17 655 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 PCDHGA9Q9Y5G4 932 aaKnown RBP8.65□□□□□ -1.02
BRIP1-204ENST00000579028 PCDHGA6Q9Y5G7 932 aa8.65□□□□□ -1.02
BRIP1-204ENST00000579028 UNC79Q9P2D8 2635 aa8.65□□□□□ -1.03
BRIP1-204ENST00000579028 MN1Q10571 1320 aaPredicted RBP8.64□□□□□ -1.03
BRIP1-204ENST00000579028 TRBV23OR9-2A0A075B6M9 112 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 A0A1W2PQ67 120 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 CDC14CA4D256 554 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 GOLGA6L3A6NEY3 463 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 TCP11X1B4DZS4 312 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 PSMD11O00231 422 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 FGF10O15520 208 aaPredicted RBP8.64□□□□□ -1.03
BRIP1-204ENST00000579028 CREB3O43889 395 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 PALMO75781 387 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 DNAJB5O75953 348 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 MAP3K6O95382 1288 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 LDLRP01130 860 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 MMP8P22894 467 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 VIPR1P32241 457 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 ETV3P41162 512 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 PPM1FP49593 454 aaPredicted RBP8.64□□□□□ -1.03
BRIP1-204ENST00000579028 PGDP52209 483 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 NDST2P52849 883 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 AP1S1P61966 158 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 DPTQ07507 201 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 MRPL49Q13405 166 aaKnown RBP8.64□□□□□ -1.03
BRIP1-204ENST00000579028 LRP8Q14114 963 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 INPP5JQ15735 1006 aaPredicted RBP8.64□□□□□ -1.03
BRIP1-204ENST00000579028 EIF2S3LQ2VIR3 472 aaKnown RBP8.64□□□□□ -1.03
BRIP1-204ENST00000579028 C1QL3Q5VWW1 255 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 PAPD7Q5XG87 772 aaKnown RBP8.64□□□□□ -1.03
BRIP1-204ENST00000579028 RAET1GQ6H3X3 334 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 Q6ZVL8 140 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 LYSMD3Q7Z3D4 306 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 HSD11B1LQ7Z5J1 315 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 PAF1Q8N7H5 531 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 GALNT6Q8NCL4 622 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 EPS8L1Q8TE68 723 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 SH3KBP1Q96B97 665 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 TRIM55Q9BYV6 548 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 EPB41L1Q9H4G0 881 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 DONSONQ9NYP3 566 aa8.64□□□□□ -1.03
BRIP1-204ENST00000579028 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.63□□□□□ -1.03
BRIP1-204ENST00000579028 PIPSLA2A3N6 862 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 GOLGA6L4A6NEF3 574 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 ARHGAP42A6NI28 874 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 BIN1O00499 593 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 HTRA2O43464 458 aaPredicted RBP8.63□□□□□ -1.03
BRIP1-204ENST00000579028 SOCS5O75159 536 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 KATNA1O75449 491 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 EML2O95834 649 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 SOD1P00441 154 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 C9P02748 559 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 CYP1A1P04798 512 aaPredicted RBP8.63□□□□□ -1.03
BRIP1-204ENST00000579028 LHCGRP22888 699 aa8.63□□□□□ -1.03
BRIP1-204ENST00000579028 VARSP26640 1264 aaKnown RBP8.63□□□□□ -1.03
BRIP1-204ENST00000579028 HTR7P34969 479 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms