RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 POLR2EP19388 210 aaKnown RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 HOXD9P28356 352 aaPredicted RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 HLA-FP30511 346 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 SSTR1P30872 391 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 MAGEA3P43357 314 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 ATP1A2P50993 1020 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 GYS2P54840 703 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 GPX6P59796 221 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 SKOR1P84550 965 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 MPP3Q13368 585 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 MTM1Q13496 603 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 RFTN1Q14699 578 aaPredicted RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 LBRQ14739 615 aaKnown RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 TTC31Q49AM3 519 aaPredicted RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 FAM133BQ5BKY9 247 aaKnown RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 HES3Q5TGS1 186 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 MBLAC2Q68D91 279 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 KIAA0895LQ68EN5 471 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 ZNF783Q6ZMS7 281 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 ARHGAP36Q6ZRI8 547 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 CIR1Q86X95 450 aaPredicted RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 CTAGE3PQ8IX95 158 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 CFAP52Q8N1V2 620 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 CPXM2Q8N436 756 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 ZNF843Q8N446 348 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 GABPB2Q8TAK5 448 aaPredicted RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 SKA1Q96BD8 255 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 ELF4Q99607 663 aaPredicted RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 TBL1YQ9BQ87 522 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 POLR1EQ9GZS1 481 aaKnown RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 IL22Q9GZX6 179 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 MUC3BQ9H195 1237 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 SLC25A51Q9H1U9 297 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 TMEM245Q9H330 911 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 SGK2Q9HBY8 427 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 NT5MQ9NPB1 228 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 PPANQ9NQ55 473 aaKnown RBP10.21□□□□□ -0.77
SS18-210ENST00000578700 NDFIP2Q9NV92 336 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 FBXL12Q9NXK8 326 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 TXNDC16Q9P2K2 825 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 SUN2Q9UH99 717 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 TBK1Q9UHD2 729 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 RABGEF1Q9UJ41 708 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 GGA2Q9UJY4 613 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 STOML2Q9UJZ1 356 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 ACTL7BQ9Y614 415 aa10.21□□□□□ -0.77
SS18-210ENST00000578700 MYO18BQ8IUG5 2567 aa10.21□□□□□ -0.78
SS18-210ENST00000578700 A0A1W2PP55 124 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 TCRBV9S1A1TA0A576 114 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 COL6A6A6NMZ7 2263 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 VILLO15195 856 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 PRAMEF11O60813 436 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 TBL1XO60907 577 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 PLXNA2O75051 1894 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 KRT38O76015 456 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 ATP5BP06576 529 aaKnown RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 PABPC1P11940 636 aaKnown RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 CES1P23141 567 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 MGAT1P26572 445 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 SLC6A4P31645 630 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 CD68P34810 354 aaPredicted RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 IRAK1P51617 712 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 RACK1P63244 317 aaKnown RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 CXADRP78310 365 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 BNIP3Q12983 259 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 NAB1Q13506 487 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 CDH18Q13634 790 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 SPARCL1Q14515 664 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 TERF2Q15554 542 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 TAF1BQ53T94 588 aaPredicted RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 SPANXN3Q5MJ09 141 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 ARMC3Q5W041 872 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 ZNF776Q68DI1 518 aaPredicted RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 NCEH1Q6PIU2 408 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 LEKR1Q6ZMV7 388 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 GPR155Q7Z3F1 870 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 SLC26A11Q86WA9 606 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 LRRC6Q86X45 466 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 CARNMT1Q8N4J0 409 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.2□□□□□ -0.78
SS18-210ENST00000578700 CNTD1Q8N815 330 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 ZNF557Q8N988 423 aaPredicted RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 PPHLN1Q8NEY8 458 aaKnown RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 IPMKQ8NFU5 416 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 OR52K1Q8NGK4 314 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 WFIKKN2Q8TEU8 576 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 MRRFQ96E11 262 aaKnown RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 SIGLEC10Q96LC7 697 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 SMC6Q96SB8 1091 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 PAFAH2Q99487 392 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 OMDQ99983 421 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 CINPQ9BW66 212 aaPredicted RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 NOL6Q9H6R4 1146 aaKnown RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 ATP13A1Q9HD20 1204 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 KCNK9Q9NPC2 374 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 CASS4Q9NQ75 786 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 NKIRAS1Q9NYS0 192 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 UBA2Q9UBT2 640 aaPredicted RBP10.2□□□□□ -0.78
SS18-210ENST00000578700 SEPT3Q9UH03 358 aa10.2□□□□□ -0.78
SS18-210ENST00000578700 PCDHGA1Q9Y5H4 931 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms