RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	TRABD2B	A6NFA1	517 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	TMEM202	A6NGA9	273 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	DDX3Y	O15523	660 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	TNF	P01375	233 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	EPO	P01588	193 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CD68	P34810	354 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	DUSP3	P51452	185 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CDK3	Q00526	305 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	OTUD4	Q01804	1114 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CDK18	Q07002	472 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CCDC181	Q5TID7	509 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ZNF605	Q86T29	641 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	TMPRSS12	Q86WS5	348 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	HID1	Q8IV36	788 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	LRRC8A	Q8IWT6	810 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ZNF567	Q8N184	647 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PDCD7	Q8N8D1	485 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	SPATA22	Q8NHS9	363 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ACTL9	Q8TC94	416 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	TSACC	Q96A04	125 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	HAUS1	Q96CS2	278 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	HES6	Q96HZ4	224 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	SMIM14	Q96QK8	99 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	FCRL5	Q96RD9	977 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	FERMT1	Q9BQL6	677 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	HERPUD2	Q9BSE4	406 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	BOC	Q9BWV1	1114 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	LGR4	Q9BXB1	951 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CLPB	Q9H078	707 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ABCG8	Q9H221	673 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	FAM153A	Q9UHL3	310 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CAPN6	Q9Y6Q1	641 aa		13.61	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PLXNB3	Q9ULL4	1909 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	LY6G6E	A0A0G2JKS1	128 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501		A0A0U1RQS6	177 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	C1orf232	A0A0U1RR37	186 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	LOC285095	A0A1B0GVY8	99 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501		H7C0C1	242 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ATXN7	O15265	892 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	YY2	O15391	372 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CLDN7	O95471	211 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	NDST3	O95803	873 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	FTCD	O95954	541 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	MT-CYB	P00156	380 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	SOD1	P00441	154 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	GP1BA	P07359	652 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ANXA6	P08133	673 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CTSE	P14091	401 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ATP5O	P48047	213 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	SPINT3	P49223	89 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	DAB2	P98082	770 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	E2F1	Q01094	437 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	GALNT3	Q14435	633 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	C6orf132	Q5T0Z8	1188 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	RAET1G	Q6H3X3	334 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CCDC70	Q6NSX1	233 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	DHRS13	Q6UX07	377 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ADAMTSL4	Q6UY14	1074 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	RFLNA	Q6ZTI6	216 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PID1	Q7Z2X4	250 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	HEATR4	Q86WZ0	1026 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CACTIN-AS1	Q8N1I8	211 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	TTC13	Q8NBP0	860 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CCHCR1	Q8TD31	782 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	SCG3	Q8WXD2	468 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	OR1E3	Q8WZA6	343 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	AP2M1	Q96CW1	435 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	FRMD8	Q9BZ67	464 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CDH19	Q9H159	772 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	FGF22	Q9HCT0	170 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	KLHL8	Q9P2G9	620 aa	Predicted RBP	13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501		U3KQA8	63 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ASH1L	Q9NR48	2969 aa	Known RBP	13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	FREM2	Q5SZK8	3169 aa		13.6	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ASXL3	Q9C0F0	2248 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	TDRD6	O60522	2096 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	GOLGA6L9	A6NEM1	432 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PRB1	P04280	392 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CCDC175	P0C221	793 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PLA2G2A	P14555	144 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	NFKB1	P19838	968 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	RBL1	P28749	1068 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	GPR1	P46091	355 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	WNT3A	P56704	352 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	EIF3E	P60228	445 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	C1orf61	Q13536	156 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PCSK7	Q16549	785 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	DEFB133	Q30KQ1	61 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	AADACL2	Q6P093	401 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	KDELC1	Q6UW63	502 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	RD3	Q7Z3Z2	195 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	GKN2	Q86XP6	184 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	CDKL3	Q8IVW4	592 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	GLMN	Q92990	594 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PDXP	Q96GD0	296 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	SCARF2	Q96GP6	870 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	ZFYVE1	Q9HBF4	777 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PKD2L2	Q9NZM6	624 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	GUCA1B	Q9UMX6	200 aa		13.59	□□□□□ -0.23
CSNK1D-208	ENST00000578501	PACSIN2	Q9UNF0	486 aa	Predicted RBP	13.59	□□□□□ -0.23

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