RNA–Protein interactions for RNA: ENST00000578122.5

IFT20-206, Transcript of intraflagellar transport 20, humanhuman

TSL 2 BASIC

Gene IFT20, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-206ENST00000578122 NLRP8Q86W28 1048 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 PELI3Q8N2H9 469 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 TTC30BQ8N4P2 665 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 OXR1Q8N573 874 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 GRK7Q8WTQ7 553 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 SCAMP4Q969E2 229 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 ELF4Q99607 663 aaPredicted RBP15.35■□□□□ 0.05
IFT20-206ENST00000578122 RIOK2Q9BVS4 552 aaKnown RBP15.35■□□□□ 0.05
IFT20-206ENST00000578122 FAM83DQ9H4H8 585 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 RAD18Q9NS91 495 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 FNDC3AQ9Y2H6 1198 aaKnown RBP15.35■□□□□ 0.05
IFT20-206ENST00000578122 OR1A2Q9Y585 309 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 MYLKQ15746 1914 aa15.35■□□□□ 0.05
IFT20-206ENST00000578122 VPS13AQ96RL7 3174 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 SPTY2D1-AS1A0A0U1RR47 76 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 CACNB4O00305 520 aaPredicted RBP15.34■□□□□ 0.05
IFT20-206ENST00000578122 SUN1O94901 812 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 PYGLP06737 847 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 TEAD1P28347 426 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 TRIM23P36406 574 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 GPR1P46091 355 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 VPS41P49754 854 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 PTK2BQ14289 1009 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 FZD2Q14332 565 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 KCTD19Q17RG1 926 aaPredicted RBP15.34■□□□□ 0.05
IFT20-206ENST00000578122 RAET1GQ6H3X3 334 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 DDX47Q9H0S4 455 aaKnown RBP15.34■□□□□ 0.05
IFT20-206ENST00000578122 WDR26Q9H7D7 661 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 PHPT1Q9NRX4 125 aaPredicted RBP15.34■□□□□ 0.05
IFT20-206ENST00000578122 CDV3Q9UKY7 258 aaKnown RBP15.34■□□□□ 0.05
IFT20-206ENST00000578122 USP34Q70CQ2 3546 aa15.34■□□□□ 0.05
IFT20-206ENST00000578122 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.33■□□□□ 0.04
IFT20-206ENST00000578122 A0A1B0GTQ1 180 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 YKT6O15498 198 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 ECEL1O95672 775 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 GAS8O95995 478 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 APRTP07741 180 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 HOXC4P09017 264 aaPredicted RBP15.33■□□□□ 0.04
IFT20-206ENST00000578122 ZNF883P0CG24 379 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 BPIP17213 487 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 TPH1P17752 444 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 HTR1BP28222 390 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 HMGCLP35914 325 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 RXRGP48443 463 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 ARRB1P49407 418 aaPredicted RBP15.33■□□□□ 0.04
IFT20-206ENST00000578122 CCT8P50990 548 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 KIAA1024LP59773 190 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 BASP1P80723 227 aaKnown RBP15.33■□□□□ 0.04
IFT20-206ENST00000578122 IL9RQ01113 521 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 GPS1Q13098 491 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 MSLNQ13421 630 aaPredicted RBP15.33■□□□□ 0.04
IFT20-206ENST00000578122 NFATC4Q14934 902 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 SHBQ15464 509 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 TAF1AQ15573 450 aaPredicted RBP15.33■□□□□ 0.04
IFT20-206ENST00000578122 RSPO4Q2I0M5 234 aaPredicted RBP15.33■□□□□ 0.04
IFT20-206ENST00000578122 ALS2CLQ60I27 953 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 ADAMTSL4Q6UY14 1074 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 PPP1R21Q6ZMI0 780 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 MACC1Q6ZN28 852 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 PARGQ86W56 976 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 HEATR4Q86WZ0 1026 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 GPR26Q8NDV2 337 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 BRSK1Q8TDC3 778 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 FUBP1Q96AE4 644 aaKnown RBP15.33■□□□□ 0.04
IFT20-206ENST00000578122 WDR92Q96MX6 357 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 AGAP2Q99490 1192 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 TEX101Q9BY14 249 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 CDH19Q9H159 772 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 BPIFA1Q9NP55 256 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 EIF2B3Q9NR50 452 aaKnown RBP15.33■□□□□ 0.04
IFT20-206ENST00000578122 TM7SF3Q9NS93 570 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 DNAJC28Q9NX36 388 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 NEU2Q9Y3R4 380 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 MYO15AQ9UKN7 3530 aa15.33■□□□□ 0.04
IFT20-206ENST00000578122 C2orf81A6NN90 581 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 CCDC188H7C350 402 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 SLC30A4O14863 429 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 BUD23O43709 281 aaKnown RBP15.32■□□□□ 0.04
IFT20-206ENST00000578122 CRTAMO95727 393 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 SOD1P00441 154 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 SDHBP21912 280 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 LPOP22079 712 aaPredicted RBP15.32■□□□□ 0.04
IFT20-206ENST00000578122 DCDC1P59894 354 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 EIF2B5Q13144 721 aaKnown RBP15.32■□□□□ 0.04
IFT20-206ENST00000578122 SLC14A1Q13336 389 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 ZNF542PQ5EBM4 170 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 HENMT1Q5T8I9 393 aaKnown RBP15.32■□□□□ 0.04
IFT20-206ENST00000578122 ENPP7Q6UWV6 458 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 KLHL7Q8IXQ5 586 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 DNAAF3Q8N9W5 541 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 OR52K1Q8NGK4 314 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 LGR4Q9BXB1 951 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 SPATA16Q9BXB7 569 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 PIH1D1Q9NWS0 290 aaKnown RBP15.32■□□□□ 0.04
IFT20-206ENST00000578122 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.32■□□□□ 0.04
IFT20-206ENST00000578122 IL17CQ9P0M4 197 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 NFKBIL1Q9UBC1 381 aaPredicted RBP15.32■□□□□ 0.04
IFT20-206ENST00000578122 PCYOX1Q9UHG3 505 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 PKP3Q9Y446 797 aa15.32■□□□□ 0.04
IFT20-206ENST00000578122 PCDHGB2Q9Y5G2 931 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms