RNA–Protein interactions for RNA: ENST00000577880.5

SMCHD1-203, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,951 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-203ENST00000577880 MTAPQ13126 283 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RIN1Q13671 783 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 AUHQ13825 339 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PKP1Q13835 747 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RFTN1Q14699 578 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MLF2Q15773 248 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SMU1Q2TAY7 513 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM45BPQ6NSW5 357 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MFSD7Q6UXD7 560 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 BEND5Q7L4P6 421 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 DCP2Q8IU60 420 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 UBE2J2Q8N2K1 259 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM132CQ8N3T6 1108 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CLEC1AQ8NC01 280 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RP9Q8TA86 221 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 FAM45AQ8TCE6 357 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OVCA2Q8WZ82 227 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 AZIN2Q96A70 460 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 LPIN3Q9BQK8 851 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZSWIM1Q9BR11 485 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CDADC1Q9BWV3 514 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SLC4A5Q9BY07 1137 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OR2AG1Q9H205 316 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ELL3Q9HB65 397 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SGK2Q9HBY8 427 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZNF304Q9HCX3 659 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MRPS30Q9NP92 439 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 B3GAT2Q9NPZ5 323 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SPHK2Q9NRA0 654 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 DNAAF2Q9NVR5 837 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 NKIRAS2Q9NYR9 191 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 IFT80Q9P2H3 777 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 BACE2Q9Y5Z0 518 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 DNMT3AQ9Y6K1 912 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ATRNL1Q5VV63 1379 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A1W2PQJ5 194 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 HYKKA2RU49 373 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 E9PAM4 449 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 POLR1CO15160 346 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 KMOO15229 486 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MGRN1O60291 552 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 LRCH4O75427 683 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 WDR47O94967 919 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 KLHL2O95198 593 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MT-ND5P03915 603 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PIRTP0C851 137 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PGAM1P18669 254 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 EPORP19235 508 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TCN2P20062 427 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TPP2P29144 1249 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OTX2P32243 289 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TMED10P49755 219 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 WNT3AP56704 352 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SIM1P81133 766 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RUNX1T1Q06455 604 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MTM1Q13496 603 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 GALNT3Q14435 633 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ANGPT1Q15389 498 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 UGCGQ16739 394 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZACNQ401N2 412 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TMEM119Q4V9L6 283 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 RHBDF2Q6PJF5 856 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.92□□□□□ -1.942e-7■■■■□ 23.8
SMCHD1-203ENST00000577880 ZNF621Q6ZSS3 439 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ERN2Q76MJ5 926 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CENPLQ8N0S6 344 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZCCHC9Q8N567 271 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 C12orf29Q8N999 325 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ST13P5Q8NFI4 369 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OR5B17Q8NGF7 314 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OR52L1Q8NGH7 329 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OR4L1Q8NH43 312 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SPPL2AQ8TCT8 520 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 BCAS4Q8TDM0 211 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CLEC4DQ8WXI8 215 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CMTM5Q96DZ9 223 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 C8orf48Q96LL4 319 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 HHIPQ96QV1 700 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 HSD17B14Q9BPX1 270 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 TACO1Q9BSH4 297 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CPEB1Q9BZB8 566 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 SLITRK2Q9H156 845 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 AVENQ9NQS1 362 aaPredicted RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PNO1Q9NRX1 252 aaKnown RBP2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 AGPAT4Q9NRZ5 378 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ADPRHL2Q9NX46 363 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 COQ3Q9NZJ6 369 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ZFP69BQ9UJL9 534 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 L1RE1Q9UN81 338 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PLAAQ9Y263 795 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 PCDHGB5Q9Y5G0 923 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ACTL7BQ9Y614 415 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 ABCC6O95255 1503 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 A0A1B0GTW7 788 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 CIB4A0PJX0 185 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 MTMR11A4FU01 709 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 C16orf96A6NNT2 1141 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 F8VZ95 297 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 INSIG1O15503 277 aa2.92□□□□□ -1.94
SMCHD1-203ENST00000577880 OR1F1O43749 312 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms