RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 MAGOHBQ96A72 148 aaKnown RBP12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TBATAQ96M53 351 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SLC13A1Q9BZW2 595 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 FAM83DQ9H4H8 585 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 KLQ9UEF7 1012 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CD84Q9UIB8 345 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 OR1A2Q9Y585 309 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SPO11Q9Y5K1 396 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SAR1BQ9Y6B6 198 aa12.67□□□□□ -0.38
CDK5RAP3-203ENST00000577442 A0A0U1RQS6 177 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 NEMP2A6NFY4 417 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 K7ESM1 405 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TNFRSF10CO14798 259 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TM4SF5O14894 197 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PHF2O75151 1096 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PIAS2O75928 621 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 RASGRP1O95267 797 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GAS8O95995 478 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 AGTP01019 485 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ALPPL2P10696 532 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 JUNDP17535 347 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 FNTAP49354 379 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 NOVA1P51513 510 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CDK3Q00526 305 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 EIF2B5Q13144 721 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SEMA5AQ13591 1074 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TPRG1LQ5T0D9 272 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 HENMT1Q5T8I9 393 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 FAXCQ5TGI0 409 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 KCTD11Q693B1 232 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 KDM7AQ6ZMT4 941 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 DBX2Q6ZNG2 339 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PHACTR4Q8IZ21 702 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TTC30BQ8N4P2 665 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PDCD7Q8N8D1 485 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SETD7Q8WTS6 366 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SCAMP4Q969E2 229 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 FUBP1Q96AE4 644 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TRIM44Q96DX7 344 aaPredicted RBP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PLEKHG4BQ96PX9 1271 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CDC6Q99741 560 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 APOL2Q9BQE5 337 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ZSCAN5AQ9BUG6 496 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 RIOK2Q9BVS4 552 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 AP1M1Q9BXS5 423 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TEX101Q9BY14 249 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ARNT2Q9HBZ2 717 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 RAB6BQ9NRW1 208 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SPASTQ9UBP0 616 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 RNF14Q9UBS8 474 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 APOBEC3BQ9UH17 382 aaKnown RBP12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PKP3Q9Y446 797 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CEP295Q9C0D2 2601 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 LRP4O75096 1905 aa12.66□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ARHGEF17Q96PE2 2063 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 C2orf81A6NN90 581 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 STX7O15400 261 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SH3BP5O60239 455 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SDC3O75056 442 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 USP12O75317 370 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CRTAMO95727 393 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CEACAM1P13688 526 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 COILP38432 576 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PAFAH1B1P43034 410 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 KCNJ1P48048 391 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SRP54P61011 504 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ETF1P62495 437 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SPARCL1Q14515 664 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SHBQ15464 509 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TAF1AQ15573 450 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ALS2CLQ60I27 953 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CCDC137Q6PK04 289 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ENPP7Q6UWV6 458 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 PPP1R21Q6ZMI0 780 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 RFLNAQ6ZTI6 216 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 DGLUCYQ7Z3D6 616 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 GATAD2AQ86YP4 633 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 HID1Q8IV36 788 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 FSTL5Q8N475 847 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TAB3Q8N5C8 712 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 TRAM1L1Q8N609 369 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ZNF548Q8NEK5 533 aaPredicted RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 DEFB124Q8NES8 71 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 OR56A4Q8NGH8 313 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 RHBDD1Q8TEB9 315 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 HIC2Q96JB3 615 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 C19orf43Q9BQ61 176 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 SPATA16Q9BXB7 569 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 ETNK1Q9HBU6 452 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 EIF2B3Q9NR50 452 aaKnown RBP12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 CSNK1G3Q9Y6M4 447 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 DGKBQ9Y6T7 804 aa12.65□□□□□ -0.38
CDK5RAP3-203ENST00000577442 DCDC2BA2VCK2 349 aa12.64□□□□□ -0.39
CDK5RAP3-203ENST00000577442 ZNF185O15231 689 aa12.64□□□□□ -0.39
CDK5RAP3-203ENST00000577442 AQP9O43315 295 aa12.64□□□□□ -0.39
CDK5RAP3-203ENST00000577442 SUN1O94901 812 aa12.64□□□□□ -0.39
CDK5RAP3-203ENST00000577442 KCNK5O95279 499 aa12.64□□□□□ -0.39
CDK5RAP3-203ENST00000577442 SOD1P00441 154 aa12.64□□□□□ -0.39
CDK5RAP3-203ENST00000577442 TNFP01375 233 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms