RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 PDZD7Q9H5P4 517 aa2.56□□□□□ -2
COPS3-213ENST00000577210 FKRPQ9H9S5 495 aa2.56□□□□□ -2
COPS3-213ENST00000577210 CNGB3Q9NQW8 809 aa2.56□□□□□ -2
COPS3-213ENST00000577210 HAUS2Q9NVX0 235 aa2.56□□□□□ -2
COPS3-213ENST00000577210 PSD3Q9NYI0 1048 aa2.56□□□□□ -2
COPS3-213ENST00000577210 BCCIPQ9P287 314 aaKnown RBP eCLIP2.56□□□□□ -2
COPS3-213ENST00000577210 CTNNAL1Q9UBT7 734 aa2.56□□□□□ -2
COPS3-213ENST00000577210 VPS28Q9UK41 221 aa2.56□□□□□ -2
COPS3-213ENST00000577210 MKLN1Q9UL63 735 aa2.56□□□□□ -2
COPS3-213ENST00000577210 CORO1CQ9ULV4 474 aaPredicted RBP2.56□□□□□ -2
COPS3-213ENST00000577210 CDC14AQ9UNH5 594 aa2.56□□□□□ -2
COPS3-213ENST00000577210 PTGDR2Q9Y5Y4 395 aa2.56□□□□□ -2
COPS3-213ENST00000577210 PIAS3Q9Y6X2 628 aa2.56□□□□□ -2
COPS3-213ENST00000577210 POLR2AP24928 1970 aaKnown RBP2.56□□□□□ -2
COPS3-213ENST00000577210 IGLV5-37A0A075B6J1 123 aa2.55□□□□□ -2
COPS3-213ENST00000577210 A0A1B0GVT2 93 aa2.55□□□□□ -2
COPS3-213ENST00000577210 DENND3A2RUS2 1198 aa2.55□□□□□ -2
COPS3-213ENST00000577210 SYNDIG1LA6NDD5 238 aa2.55□□□□□ -2
COPS3-213ENST00000577210 A8MZ25 164 aa2.55□□□□□ -2
COPS3-213ENST00000577210 MAP2K7O14733 419 aa2.55□□□□□ -2
COPS3-213ENST00000577210 ACOT8O14734 319 aa2.55□□□□□ -2
COPS3-213ENST00000577210 VILLO15195 856 aa2.55□□□□□ -2
COPS3-213ENST00000577210 BUD23O43709 281 aaKnown RBP2.55□□□□□ -2
COPS3-213ENST00000577210 RFPL2O75678 378 aa2.55□□□□□ -2
COPS3-213ENST00000577210 NKX2-2O95096 273 aa2.55□□□□□ -2
COPS3-213ENST00000577210 ARRB2P32121 409 aa2.55□□□□□ -2
COPS3-213ENST00000577210 PBX3P40426 434 aa2.55□□□□□ -2
COPS3-213ENST00000577210 F2RL1P55085 397 aa2.55□□□□□ -2
COPS3-213ENST00000577210 CDH8P55286 799 aa2.55□□□□□ -2
COPS3-213ENST00000577210 TAS2R40P59535 323 aa2.55□□□□□ -2
COPS3-213ENST00000577210 ABATP80404 500 aa2.55□□□□□ -2
COPS3-213ENST00000577210 CALD1Q05682 793 aaKnown RBP2.55□□□□□ -2
COPS3-213ENST00000577210 LTBQ06643 244 aa2.55□□□□□ -2
COPS3-213ENST00000577210 TRAF1Q13077 416 aa2.55□□□□□ -2
COPS3-213ENST00000577210 ACVR2BQ13705 512 aa2.55□□□□□ -2
COPS3-213ENST00000577210 TNFAIP1Q13829 316 aa2.55□□□□□ -2
COPS3-213ENST00000577210 HNF4GQ14541 408 aa2.55□□□□□ -2
COPS3-213ENST00000577210 MED22Q15528 200 aa2.55□□□□□ -2
COPS3-213ENST00000577210 PNLIPRP3Q17RR3 467 aa2.55□□□□□ -2
COPS3-213ENST00000577210 COL28A1Q2UY09 1125 aa2.55□□□□□ -2
COPS3-213ENST00000577210 SGO1Q5FBB7 561 aa2.55□□□□□ -2
COPS3-213ENST00000577210 CXorf66Q5JRM2 361 aaPredicted RBP2.55□□□□□ -2
COPS3-213ENST00000577210 MFSD4BQ5TF39 518 aa2.55□□□□□ -2
COPS3-213ENST00000577210 TTI2Q6NXR4 508 aa2.55□□□□□ -2
COPS3-213ENST00000577210 SEPT14Q6ZU15 432 aa2.55□□□□□ -2
COPS3-213ENST00000577210 CREB3L2Q70SY1 520 aa2.55□□□□□ -2
COPS3-213ENST00000577210 DPPA4Q7L190 304 aa2.55□□□□□ -2
COPS3-213ENST00000577210 ARID3BQ8IVW6 561 aaPredicted RBP2.55□□□□□ -2
COPS3-213ENST00000577210 ADHFE1Q8IWW8 467 aa2.55□□□□□ -2
COPS3-213ENST00000577210 TTC39CQ8N584 583 aa2.55□□□□□ -2
COPS3-213ENST00000577210 Q8N9P0 234 aaPredicted RBP2.55□□□□□ -2
COPS3-213ENST00000577210 ARRDC2Q8TBH0 407 aa2.55□□□□□ -2
COPS3-213ENST00000577210 GPT2Q8TD30 523 aa2.55□□□□□ -2
COPS3-213ENST00000577210 CREB3L4Q8TEY5 395 aa2.55□□□□□ -2
COPS3-213ENST00000577210 PABPC5Q96DU9 382 aaKnown RBP2.55□□□□□ -2
COPS3-213ENST00000577210 FAM120BQ96EK7 910 aaKnown RBP2.55□□□□□ -2
COPS3-213ENST00000577210 ITPAQ9BY32 194 aa2.55□□□□□ -2
COPS3-213ENST00000577210 MRPL1Q9BYD6 325 aaKnown RBP2.55□□□□□ -2
COPS3-213ENST00000577210 GHITMQ9H3K2 345 aa2.55□□□□□ -2
COPS3-213ENST00000577210 OSGEPL1Q9H4B0 414 aa2.55□□□□□ -2
COPS3-213ENST00000577210 PPP1R3EQ9H7J1 279 aa2.55□□□□□ -2
COPS3-213ENST00000577210 SCPEP1Q9HB40 452 aa2.55□□□□□ -2
COPS3-213ENST00000577210 CD93Q9NPY3 652 aa2.55□□□□□ -2
COPS3-213ENST00000577210 ANKEF1Q9NU02 776 aa2.55□□□□□ -2
COPS3-213ENST00000577210 SEPT11Q9NVA2 429 aaKnown RBP2.55□□□□□ -2
COPS3-213ENST00000577210 SMARCAL1Q9NZC9 954 aa2.55□□□□□ -2
COPS3-213ENST00000577210 ACSL5Q9ULC5 683 aa2.55□□□□□ -2
COPS3-213ENST00000577210 NENFQ9UMX5 172 aa2.55□□□□□ -2
COPS3-213ENST00000577210 GPR34Q9UPC5 381 aa2.55□□□□□ -2
COPS3-213ENST00000577210 EXO1Q9UQ84 846 aaKnown RBP2.55□□□□□ -2
COPS3-213ENST00000577210 AMDHD2Q9Y303 409 aa2.55□□□□□ -2
COPS3-213ENST00000577210 TTLL3Q9Y4R7 772 aa2.55□□□□□ -2
COPS3-213ENST00000577210 KAT6AQ92794 2004 aa2.54□□□□□ -2
COPS3-213ENST00000577210 FRMD3A2A2Y4 597 aa2.54□□□□□ -2
COPS3-213ENST00000577210 CPED1A4D0V7 1026 aa2.54□□□□□ -2
COPS3-213ENST00000577210 EME2A4GXA9 379 aaPredicted RBP2.54□□□□□ -2
COPS3-213ENST00000577210 LRRC72A6NJI9 287 aa2.54□□□□□ -2
COPS3-213ENST00000577210 C15orf62A8K5M9 175 aa2.54□□□□□ -2
COPS3-213ENST00000577210 CCER2I3L3R5 266 aa2.54□□□□□ -2
COPS3-213ENST00000577210 TIMM23O14925 209 aa2.54□□□□□ -2
COPS3-213ENST00000577210 TGFB1I1O43294 461 aa2.54□□□□□ -2
COPS3-213ENST00000577210 PTP4A3O75365 173 aa2.54□□□□□ -2
COPS3-213ENST00000577210 MLYCDO95822 493 aa2.54□□□□□ -2
COPS3-213ENST00000577210 RB1P06400 928 aa2.54□□□□□ -2
COPS3-213ENST00000577210 ZNF23P17027 643 aa2.54□□□□□ -2
COPS3-213ENST00000577210 MCM3P25205 808 aa2.54□□□□□ -2
COPS3-213ENST00000577210 TM4SF1P30408 202 aa2.54□□□□□ -2
COPS3-213ENST00000577210 BDKRB2P30411 391 aa2.54□□□□□ -2
COPS3-213ENST00000577210 CCKBRP32239 447 aa2.54□□□□□ -2
COPS3-213ENST00000577210 ICAM3P32942 547 aa2.54□□□□□ -2
COPS3-213ENST00000577210 ACTN2P35609 894 aa2.54□□□□□ -2
COPS3-213ENST00000577210 USP8P40818 1118 aa2.54□□□□□ -2
COPS3-213ENST00000577210 IL15P40933 162 aaPredicted RBP2.54□□□□□ -2
COPS3-213ENST00000577210 RGS2P41220 211 aa2.54□□□□□ -2
COPS3-213ENST00000577210 RAD52P43351 418 aa2.54□□□□□ -2
COPS3-213ENST00000577210 ART1P52961 327 aa2.54□□□□□ -2
COPS3-213ENST00000577210 PMS2P54278 862 aa2.54□□□□□ -2
COPS3-213ENST00000577210 FOXG1P55316 489 aaPredicted RBP2.54□□□□□ -2
COPS3-213ENST00000577210 TUBA1BP68363 451 aa2.54□□□□□ -2
COPS3-213ENST00000577210 MC1RQ01726 317 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms