RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 SLC17A4Q9Y2C5 497 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 TMEM98Q9Y2Y6 226 aa16.2■□□□□ 0.18
CTDNEP1-211ENST00000575783 ANKRD36A6QL64 1941 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 BIN1O00499 593 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 CREG1O75629 220 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 PALMO75781 387 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 FGFR1OPO95684 399 aaKnown RBP16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 EML2O95834 649 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 ETV3P41162 512 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 CSNK1DP48730 415 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 HDAC4P56524 1084 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 HHEXQ03014 270 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 PRR30Q53SZ7 412 aaPredicted RBP16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 C1QL3Q5VWW1 255 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 RAET1GQ6H3X3 334 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 STRADAQ7RTN6 431 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 SLFN11Q7Z7L1 901 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 UMODL1-AS1Q8N2C9 162 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 SFRP1Q8N474 314 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 JOSD2Q8TAC2 188 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 ELMO2Q96JJ3 720 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 OR2M4Q96R27 311 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 ZNF768Q9H5H4 540 aaKnown RBP16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 PDFQ9HBH1 243 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 DONSONQ9NYP3 566 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 LUZP4Q9P127 313 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 ERRFI1Q9UJM3 462 aaPredicted RBP16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 ATP6V1DQ9Y5K8 247 aa16.19■□□□□ 0.18
CTDNEP1-211ENST00000575783 POLQO75417 2590 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 PRAMEF11O60813 436 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 LSM8O95777 96 aaKnown RBP16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 CASP14P31944 242 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 SCNN1BP51168 640 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 SEMA5AQ13591 1074 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 CNGA3Q16281 694 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 SCYL2Q6P3W7 929 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 LYSMD3Q7Z3D4 306 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 RASGRP3Q8IV61 690 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 APLFQ8IW19 511 aaPredicted RBP16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 FNIP1Q8TF40 1166 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 PDCD6IPQ8WUM4 868 aaKnown RBP16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 TCTN2Q96GX1 697 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 CELF6Q96J87 481 aaKnown RBP16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 SLC25A23Q9BV35 468 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 CATSPERBQ9H7T0 1116 aa16.18■□□□□ 0.18
CTDNEP1-211ENST00000575783 A6NCN8 305 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 WIPF3A6NGB9 483 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 C2CD4BA6NLJ0 364 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 TRAFD1O14545 582 aaPredicted RBP16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 KIAA0754O94854 1291 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 SORBS2O94875 1100 aaKnown RBP16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 MMEP08473 750 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 CCNYL3P0C7X3 344 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 PTPN9P43378 593 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 CCL11P51671 97 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 ESPL1Q14674 2120 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 Q6ZVL8 140 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 HSD11B1LQ7Z5J1 315 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 CENPIQ92674 756 aaPredicted RBP16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 NTAN1Q96AB6 310 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 DTD2Q96FN9 168 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 CINPQ9BW66 212 aaPredicted RBP16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 SLC29A3Q9BZD2 475 aa16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 SIDT1Q9NXL6 827 aaKnown RBP16.17■□□□□ 0.18
CTDNEP1-211ENST00000575783 C2CD3Q4AC94 2353 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 TTC24A2A3L6 582 aaPredicted RBP16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 GTPBP10A4D1E9 387 aaKnown RBP16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 WASH4PA8MWX3 477 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 HEXIM1O94992 359 aaKnown RBP16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 NDUFA10O95299 355 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 LDLRP01130 860 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 VIPR1P32241 457 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 GPR1P46091 355 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 SEPHS1P49903 392 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 PAPOLAP51003 745 aaKnown RBP16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 NOMO3P69849 1222 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 CHAF1BQ13112 559 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 PYCR3Q53H96 274 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 SMYD5Q6GMV2 418 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 NOP9Q86U38 636 aaKnown RBP16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 TRIM74Q86UV6 250 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 SH3KBP1Q96B97 665 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 SCARF2Q96GP6 870 aaPredicted RBP16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 NSMCE3Q96MG7 304 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 TIGD1Q96MW7 591 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 OR6C1Q96RD1 312 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 TBC1D10AQ9BXI6 508 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 MFRPQ9BY79 579 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 STN1Q9H668 368 aaKnown RBP16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 LRRC19Q9H756 370 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 SLAMF7Q9NQ25 335 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 KCTD5Q9NXV2 234 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 LNPEPQ9UIQ6 1025 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 PADI1Q9ULC6 663 aa16.16■□□□□ 0.18
CTDNEP1-211ENST00000575783 SH3BP2P78314 561 aa16.15■□□□□ 0.18
CTDNEP1-211ENST00000575783 DNASE1L3Q13609 305 aa16.15■□□□□ 0.18
CTDNEP1-211ENST00000575783 CPZQ66K79 652 aa16.15■□□□□ 0.18
CTDNEP1-211ENST00000575783 GALNT13Q8IUC8 556 aa16.15■□□□□ 0.18
CTDNEP1-211ENST00000575783 PLXDC1Q8IUK5 500 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms