RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 SFRP1Q8N474 314 aa9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 SLC37A2Q8TED4 501 aa9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 AHCYL2Q96HN2 611 aaKnown RBP9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 CNPY3Q9BT09 278 aa9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 CINPQ9BW66 212 aaPredicted RBP9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 GANQ9H2C0 597 aa9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 APMAPQ9HDC9 416 aa9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 PLEKHB1Q9UF11 243 aaPredicted RBP9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 KCTD3Q9Y597 815 aa9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 PCDHGC4Q9Y5F7 938 aa9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 LRBAP50851 2863 aa9.93□□□□□ -0.82
CALCOCO2-227ENST00000575560 TRBV23OR9-2A0A075B6M9 112 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 A0A1W2PQ67 120 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 TTC24A2A3L6 582 aaPredicted RBP9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 A8MU76 341 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 PSMD11O00231 422 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 EML2O95834 649 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 SOD1P00441 154 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 CALB1P05937 261 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 KRT7P08729 469 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 NR1D1P20393 614 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 LHCGRP22888 699 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 MAN1A1P33908 653 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 STAT5AP42229 794 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 NSFP46459 744 aaKnown RBP9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 RENBPP51606 427 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 IL10RBQ08334 325 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 SLC10A7Q0GE19 358 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 MAP7Q14244 749 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 CLEC16AQ2KHT3 1053 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 PYCR3Q53H96 274 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 HSP90AA4PQ58FG1 418 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 SNAP47Q5SQN1 464 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 C16orf46Q6P387 395 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 ARHGAP36Q6ZRI8 547 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 MON1BQ7L1V2 547 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 KDELC2Q7Z4H8 507 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 TECPR1Q7Z6L1 1165 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 ZNF761Q86XN6 746 aaPredicted RBP9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 PAF1Q8N7H5 531 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 TEX19Q8NA77 164 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 OR10G6Q8NH81 332 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 SCRN2Q96FV2 425 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 OR2M4Q96R27 311 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 SLC38A3Q99624 504 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 TMEM98Q9Y2Y6 226 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 PPIL1Q9Y3C6 166 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 CREBBPQ92793 2442 aa9.92□□□□□ -0.82
CALCOCO2-227ENST00000575560 NPIPB15A6NHN6 443 aaPredicted RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 EIF3CLB5ME19 914 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 EEF2KO00418 725 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 PES1O00541 588 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 POLR1CO15160 346 aaPredicted RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 SOCS5O75159 536 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 FURINP09958 794 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 ERCC2P18074 760 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 OGDHQ02218 1023 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 LRP8Q14114 963 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 LBRQ14739 615 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 PTPRRQ15256 657 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 CA9Q16790 459 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 TCP11X2Q5H9J9 407 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 DENND2CQ68D51 928 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 RAET1GQ6H3X3 334 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 CAPRIN2Q6IMN6 1127 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 ADAMTSL4Q6UY14 1074 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 RFLNAQ6ZTI6 216 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 NLRP8Q86W28 1048 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 CCDC13Q8IYE1 715 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 ESX1Q8N693 406 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 NPWQ8N729 165 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 NCSTNQ92542 709 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 ZNF599Q96NL3 588 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 MCEEQ96PE7 176 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 MCCC1Q96RQ3 725 aaPredicted RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 EIF3CQ99613 913 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 VPS16Q9H269 839 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 SP110Q9HB58 689 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 NOD2Q9HC29 1040 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 SARS2Q9NP81 518 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 PRDM8Q9NQV8 689 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 SAMSN1Q9NSI8 373 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 GPATCH2LQ9NWQ4 482 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 PHTF1Q9UMS5 762 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 AP4E1Q9UPM8 1137 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 MRPS18BQ9Y676 258 aaKnown RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 RPS6KL1Q9Y6S9 549 aa9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 RP1L1Q8IWN7 2480 aaPredicted RBP9.91□□□□□ -0.82
CALCOCO2-227ENST00000575560 ANKRD62A6NC57 917 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 GOLGA6CA6NDK9 693 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 GOLGA6BA6NDN3 693 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 MKRN2OSH3BPM6 223 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 DFFAO00273 331 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 EPHB6O15197 1021 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 MAP3K6O95382 1288 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 PEX11BO96011 259 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 CPP00450 1065 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 GOLGA6DP0CG33 693 aa9.9□□□□□ -0.82
CALCOCO2-227ENST00000575560 CYP2A6P11509 494 aaPredicted RBP9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms