RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 SCAMP4Q969E2 229 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 FUBP1Q96AE4 644 aaKnown RBP15.16■□□□□ 0.02
LITAF-217ENST00000575426 TRIM44Q96DX7 344 aaPredicted RBP15.16■□□□□ 0.02
LITAF-217ENST00000575426 WDR24Q96S15 920 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 APOL2Q9BQE5 337 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 GORASP1Q9BQQ3 440 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 RIOK2Q9BVS4 552 aaKnown RBP15.16■□□□□ 0.02
LITAF-217ENST00000575426 SLC13A1Q9BZW2 595 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 ETNK1Q9HBU6 452 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 KLQ9UEF7 1012 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 MOSPD1Q9UJG1 213 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 PKP3Q9Y446 797 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 SPO11Q9Y5K1 396 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 SAR1BQ9Y6B6 198 aa15.16■□□□□ 0.02
LITAF-217ENST00000575426 NEMP2A6NFY4 417 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 C2orf81A6NN90 581 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 K7ESM1 405 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 ZNF185O15231 689 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 SDC3O75056 442 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 USP12O75317 370 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 RASGRP1O95267 797 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 GAS8O95995 478 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 TNFP01375 233 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 MYCLP1P12525 358 aaPredicted RBP15.15■□□□□ 0.02
LITAF-217ENST00000575426 CTSEP14091 401 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 ETS1P14921 441 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 HMGCLP35914 325 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 PAFAH1B1P43034 410 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 EIF2B5Q13144 721 aaKnown RBP15.15■□□□□ 0.02
LITAF-217ENST00000575426 SHBQ15464 509 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 ZDHHC20Q5W0Z9 365 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 PAPD7Q5XG87 772 aaKnown RBP15.15■□□□□ 0.02
LITAF-217ENST00000575426 DBX2Q6ZNG2 339 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 DGLUCYQ7Z3D6 616 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 RD3Q7Z3Z2 195 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 HID1Q8IV36 788 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 DEFB124Q8NES8 71 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 OR56A4Q8NGH8 313 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 SAP25Q8TEE9 199 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 SPATA16Q9BXB7 569 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 RAB6BQ9NRW1 208 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.15■□□□□ 0.027e-7■□□□□ 8.8
LITAF-217ENST00000575426 SPASTQ9UBP0 616 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 APOBEC3BQ9UH17 382 aaKnown RBP15.15■□□□□ 0.02
LITAF-217ENST00000575426 MYLKQ15746 1914 aa15.15■□□□□ 0.02
LITAF-217ENST00000575426 TNFRSF10CO14798 259 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 STX7O15400 261 aaKnown RBP15.14■□□□□ 0.01
LITAF-217ENST00000575426 PIAS2O75928 621 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 CRTAMO95727 393 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 AP2A1O95782 977 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 ZSCAN5DPP0CG00 497 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 ALPPL2P10696 532 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 CEACAM1P13688 526 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 NME1P15531 152 aaKnown RBP15.14■□□□□ 0.01
LITAF-217ENST00000575426 DGKAP23743 735 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 CASQ1P31415 396 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 RPL22P35268 128 aaKnown RBP15.14■□□□□ 0.01
LITAF-217ENST00000575426 NOVA1P51513 510 aaKnown RBP15.14■□□□□ 0.01
LITAF-217ENST00000575426 SRP54P61011 504 aaKnown RBP15.14■□□□□ 0.01
LITAF-217ENST00000575426 CDK3Q00526 305 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 PDE1BQ01064 536 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 TPRG1LQ5T0D9 272 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 ALS2CLQ60I27 953 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 KCTD11Q693B1 232 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 CCDC137Q6PK04 289 aaKnown RBP15.14■□□□□ 0.01
LITAF-217ENST00000575426 ADAMTSL4Q6UY14 1074 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 PPP1R21Q6ZMI0 780 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 PIP4P1Q86T03 277 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 PRUNE1Q86TP1 453 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 KLHDC8BQ8IXV7 354 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 PHACTR4Q8IZ21 702 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 PELI3Q8N2H9 469 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 C17orf53Q8N3J3 647 aaPredicted RBP15.14■□□□□ 0.01
LITAF-217ENST00000575426 DNAAF3Q8N9W5 541 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 BRSK1Q8TDC3 778 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 GRK7Q8WTQ7 553 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 TSACCQ96A04 125 aaPredicted RBP15.14■□□□□ 0.01
LITAF-217ENST00000575426 HIC2Q96JB3 615 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 CAPZA3Q96KX2 299 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 CDC6Q99741 560 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 ZSCAN5AQ9BUG6 496 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 TEX101Q9BY14 249 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 ARNT2Q9HBZ2 717 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 BPIFA1Q9NP55 256 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 DOLKQ9UPQ8 538 aa15.14■□□□□ 0.01
LITAF-217ENST00000575426 ZFC3H1O60293 1989 aaKnown RBP15.14■□□□□ 0.01
LITAF-217ENST00000575426 AURKAO14965 403 aa15.13■□□□□ 0.01
LITAF-217ENST00000575426 PHF2O75151 1096 aa15.13■□□□□ 0.01
LITAF-217ENST00000575426 PPFIA2O75334 1257 aa15.13■□□□□ 0.01
LITAF-217ENST00000575426 KCNK5O95279 499 aa15.13■□□□□ 0.01
LITAF-217ENST00000575426 ASMTLO95671 621 aa15.13■□□□□ 0.01
LITAF-217ENST00000575426 LPOP22079 712 aaPredicted RBP15.13■□□□□ 0.01
LITAF-217ENST00000575426 COILP38432 576 aaPredicted RBP15.13■□□□□ 0.01
LITAF-217ENST00000575426 HK3P52790 923 aa15.13■□□□□ 0.01
LITAF-217ENST00000575426 DCDC1P59894 354 aa15.13■□□□□ 0.01
LITAF-217ENST00000575426 BASP1P80723 227 aaKnown RBP15.13■□□□□ 0.01
LITAF-217ENST00000575426 OLIG2Q13516 323 aa15.13■□□□□ 0.01
LITAF-217ENST00000575426 TAF1AQ15573 450 aaPredicted RBP15.13■□□□□ 0.01
LITAF-217ENST00000575426 CYP1B1Q16678 543 aa15.13■□□□□ 0.01
LITAF-217ENST00000575426 PRRT3Q5FWE3 981 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms