RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 TMPRSS7Q7RTY8 843 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 PEX26Q7Z412 305 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 TMC3Q7Z5M5 1100 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 TRIM74Q86UV6 250 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 NLRP8Q86W28 1048 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 C17orf82Q86X59 251 aaPredicted RBP8.65□□□□□ -1.02
SMG6-216ENST00000575176 CCDC50Q8IVM0 306 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 REXO1L1PQ8IX06 675 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 GLIS1Q8NBF1 620 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 KYQ8NBH2 561 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 GPR26Q8NDV2 337 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 CCL4L1Q8NHW4 92 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 NSMCE1Q8WV22 266 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 ATG4AQ8WYN0 398 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 P3H4Q92791 437 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 TSACCQ96A04 125 aaPredicted RBP8.65□□□□□ -1.02
SMG6-216ENST00000575176 APOLD1Q96LR9 279 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 WDR92Q96MX6 357 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 C1QTNF7Q9BXJ2 289 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 WDR26Q9H7D7 661 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 UBP1Q9NZI7 540 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 RABGEF1Q9UJ41 708 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 AMFRQ9UKV5 643 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 PPP2R2CQ9Y2T4 447 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.65□□□□□ -1.02
SMG6-216ENST00000575176 MSRB2Q9Y3D2 182 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 ZNF711Q9Y462 761 aa8.65□□□□□ -1.02
SMG6-216ENST00000575176 CFAP46Q8IYW2 2715 aa8.65□□□□□ -1.03
SMG6-216ENST00000575176 KNTC1P50748 2209 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 C1orf232A0A0U1RR37 186 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 PRSS38A1L453 326 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 A6NCN8 305 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 C1QTNF9BB2RNN3 333 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 TPP1O14773 563 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 TNFRSF10CO14798 259 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 YY2O15391 372 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 KALRNO60229 2985 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 DNAJC6O75061 913 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 RFPL3O75679 317 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 IPO7O95373 1038 aaKnown RBP8.64□□□□□ -1.03
SMG6-216ENST00000575176 NDST3O95803 873 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 C1QTNF9P0C862 333 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 RBP3P10745 1247 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 BPIP17213 487 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 PSMB4P28070 264 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 SRP54P61011 504 aaKnown RBP8.64□□□□□ -1.03
SMG6-216ENST00000575176 INSM1Q01101 510 aaPredicted RBP8.64□□□□□ -1.03
SMG6-216ENST00000575176 ITKQ08881 620 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 C1orf61Q13536 156 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 SUZ12Q15022 739 aaKnown RBP8.64□□□□□ -1.03
SMG6-216ENST00000575176 ACOX1Q15067 660 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 SLC1A5Q15758 541 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 DEFB133Q30KQ1 61 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 INAVAQ3KP66 663 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 PRRT3Q5FWE3 981 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 PERM1Q5SV97 790 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 C6orf132Q5T0Z8 1188 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 ZCCHC8Q6NZY4 707 aaKnown RBP8.64□□□□□ -1.03
SMG6-216ENST00000575176 GUSBP11Q6P575 273 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 DHRS13Q6UX07 377 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 RANBP10Q6VN20 620 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 CCNI2Q6ZMN8 369 aaPredicted RBP8.64□□□□□ -1.03
SMG6-216ENST00000575176 GPR156Q8NFN8 814 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 OR56A4Q8NGH8 313 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 CCDC97Q96F63 343 aaPredicted RBP8.64□□□□□ -1.03
SMG6-216ENST00000575176 SPATA13Q96N96 652 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 VAT1Q99536 393 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 RIOK2Q9BVS4 552 aaKnown RBP8.64□□□□□ -1.03
SMG6-216ENST00000575176 MAK16Q9BXY0 300 aaKnown RBP8.64□□□□□ -1.03
SMG6-216ENST00000575176 TMEM168Q9H0V1 697 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 MAGEE1Q9HCI5 957 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 SEPT10Q9P0V9 454 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 DNPEPQ9ULA0 475 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 GUCA1BQ9UMX6 200 aa8.64□□□□□ -1.03
SMG6-216ENST00000575176 EME2A4GXA9 379 aaPredicted RBP8.63□□□□□ -1.03
SMG6-216ENST00000575176 C5orf60A6NFR6 353 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 MTSS1O43312 755 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 LIASO43766 372 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 PMPCBO75439 489 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 TRIM16O95361 564 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 METTL18O95568 372 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 LDOC1O95751 146 aaPredicted RBP8.63□□□□□ -1.03
SMG6-216ENST00000575176 EML2O95834 649 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 EPOP01588 193 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 IVLP07476 585 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 CKMT2P17540 419 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 POLD2P49005 469 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 THOP1P52888 689 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 EIF3EP60228 445 aaKnown RBP8.63□□□□□ -1.03
SMG6-216ENST00000575176 PPARDQ03181 441 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 PTK2BQ14289 1009 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 TCEA2Q15560 299 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 PCSK7Q16549 785 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 KCTD19Q17RG1 926 aaPredicted RBP8.63□□□□□ -1.03
SMG6-216ENST00000575176 ANKRD20A2Q5SQ80 823 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 ANKRD20A1Q5TYW2 823 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 ANKRD20A3Q5VUR7 823 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 DENND2CQ68D51 928 aa8.63□□□□□ -1.03
SMG6-216ENST00000575176 BZW1Q7L1Q6 419 aaKnown RBP8.63□□□□□ -1.03
SMG6-216ENST00000575176 SLC13A5Q86YT5 568 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms