RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 PFDN6O15212 129 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 PENKP01210 267 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-208ENST00000574755 THRAP10827 490 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 PSMA3P25788 255 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 PTDSS1P48651 473 aaKnown RBP14.01□□□□□ -0.17
VPS33B-208ENST00000574755 TTPAP49638 278 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 HERVK_113P63132 956 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 NFKB2Q00653 900 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 GALNT1Q10472 559 aaPredicted RBP14.01□□□□□ -0.17
VPS33B-208ENST00000574755 OR4D1Q15615 310 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 PTPRNQ16849 979 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 PAQR3Q6TCH7 311 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 TMC8Q8IU68 726 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 PIANPQ8IYJ0 282 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 DEFB107AQ8IZN7 70 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 ELMOD1Q8N336 334 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 FIBCD1Q8N539 461 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 CEP70Q8NHQ1 597 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 MAELQ96JY0 434 aaKnown RBP14.01□□□□□ -0.17
VPS33B-208ENST00000574755 FAR2Q96K12 515 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 MARK4Q96L34 752 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 RTKNQ9BST9 563 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 TRMOQ9BU70 441 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 ERVK-6Q9BXR3 956 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 TNFRSF12AQ9NP84 129 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 PKP3Q9Y446 797 aa14.01□□□□□ -0.17
VPS33B-208ENST00000574755 TRAV19A0A0A6YYK7 116 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 RGSL1A5PLK6 1076 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 SDHDO14521 159 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 KIAA0355O15063 1070 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 CXCL14O95715 111 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 ADH1AP07327 375 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 RPSAP08865 295 aaKnown RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 TSPAN8P19075 237 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 ITGAXP20702 1163 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 ERFP50548 548 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 SLC7A9P82251 487 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 BTKQ06187 659 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 ZRSR2Q15696 482 aaKnown RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 ARMC12Q5T9G4 340 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 CCDC149Q6ZUS6 474 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 HTR3DQ70Z44 454 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 SNX32Q86XE0 403 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 CPSF7Q8N684 471 aaKnown RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 PAF1Q8N7H5 531 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 RHEBL1Q8TAI7 183 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 DTX3LQ8TDB6 740 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 ACTRT2Q8TDY3 377 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 GCNAQ96QF7 691 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 DNMT3BQ9UBC3 853 aaKnown RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 STOML1Q9UBI4 398 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 ZNF510Q9Y2H8 683 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 MED16Q9Y2X0 877 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 KIAA0100Q14667 2235 aaKnown RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 UBXN8O00124 270 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 SLC22A2O15244 555 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 SMAD6O43541 496 aaKnown RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 FZD6O60353 706 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 CD1EP15812 388 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 CTPS1P17812 591 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 CCNG1P51959 295 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 ACTR3P61158 418 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 AP1S1P61966 158 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 SATB1Q01826 763 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 RAD51Q06609 339 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 PFKFB4Q16877 469 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 MPPE1Q53F39 396 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 PPM1LQ5SGD2 360 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 RAB44Q7Z6P3 723 aaPredicted RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 CAMK1DQ8IU85 385 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14□□□□□ -0.17
VPS33B-208ENST00000574755 TTC30BQ8N4P2 665 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 PTGR2Q8N8N7 351 aaPredicted RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 USP13Q92995 863 aaPredicted RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 ACDQ96AP0 544 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 MYO19Q96H55 970 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 BIRC8Q96P09 236 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 GPR21Q99679 349 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 CORO1BQ9BR76 489 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 LRRC3Q9BY71 257 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 GPR63Q9BZJ6 419 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 TFB2MQ9H5Q4 396 aaKnown RBP14□□□□□ -0.17
VPS33B-208ENST00000574755 ZNF385DQ9H6B1 395 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 CDH22Q9UJ99 828 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 ZNF711Q9Y462 761 aa14□□□□□ -0.17
VPS33B-208ENST00000574755 UBFD1O14562 309 aaKnown RBP13.99□□□□□ -0.17
VPS33B-208ENST00000574755 AIM2O14862 343 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 OR1I1O60431 355 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 PYGLP06737 847 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 ALPIP09923 528 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 GFAPP14136 432 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 ADSLP30566 484 aaPredicted RBP13.99□□□□□ -0.17
VPS33B-208ENST00000574755 NUDT2P50583 147 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 C1QTNF8P60827 252 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 CYLC2Q14093 348 aaPredicted RBP13.99□□□□□ -0.17
VPS33B-208ENST00000574755 CPXM2Q8N436 756 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 KREMEN2Q8NCW0 462 aa13.99□□□□□ -0.17
VPS33B-208ENST00000574755 RP9Q8TA86 221 aaKnown RBP13.99□□□□□ -0.17
VPS33B-208ENST00000574755 ATOH8Q96SQ7 321 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms