RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 C7P10643 843 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 ACADMP11310 421 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 CTBP1Q13363 440 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 ACOX1Q15067 660 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 TMEM52BQ4KMG9 183 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 Q6ZVL8 140 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 LDB1Q86U70 411 aaPredicted RBP23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 CNTN4Q8IWV2 1026 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 HHIPQ96QV1 700 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 OSBPL6Q9BZF3 934 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 FAM96AQ9H5X1 160 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 CATSPERZQ9NTU4 200 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 PKD2L2Q9NZM6 624 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 COQ6Q9Y2Z9 468 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 SIT1Q9Y3P8 196 aa23.97■■□□□ 1.43
ATPAF1-213ENST00000574428 ZNF106Q9H2Y7 1883 aaKnown RBP23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 H0Y858 1186 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 CD3EAPO15446 510 aaKnown RBP23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 OPA1O60313 960 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 SPAM1P38567 509 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 MPP1Q00013 466 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 CCDC15Q0P6D6 951 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 NAB1Q13506 487 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 SEMA3AQ14563 771 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 ANO7Q6IWH7 933 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 FAM124AQ86V42 546 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 SLC26A11Q86WA9 606 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 PGBD3Q8N328 593 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 CBARPQ8N350 705 aaPredicted RBP23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 FAM131CQ96AQ9 280 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 C19orf43Q9BQ61 176 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 CHRDQ9H2X0 955 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 BCCIPQ9P287 314 aaKnown RBP eCLIP23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 PSMC3IPQ9P2W1 217 aaPredicted RBP23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 GLYATL1P3A0A0U1RQE8 302 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 AP1G1O43747 822 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 CDH16O75309 829 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 PRAMEF1O95521 474 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 PDGFBP01127 241 aaPredicted RBP23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 MYZAPP0CAP1 466 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 C6P13671 934 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 GM2AP17900 193 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 FOXN2P32314 431 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 CDKN1CP49918 316 aaPredicted RBP23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 SIGLEC14Q08ET2 396 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 ZRANB3Q5FWF4 1079 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 PACS1Q6VY07 963 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 STRA8Q7Z7C7 330 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 TSTD1Q8NFU3 115 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 OR14C36Q8NHC7 312 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 CALML6Q8TD86 181 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 CXorf40AQ8TE69 158 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 PPCSQ9HAB8 311 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 EURLQ9NYK6 297 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 TXNDC16Q9P2K2 825 aa23.96■■□□□ 1.43
ATPAF1-213ENST00000574428 GOLGA6L10A6NI86 522 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 SRP72O76094 671 aaKnown RBP23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 PCDH8O95206 1070 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 ABCG1P45844 678 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 TMED2Q15363 201 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 FASTKD1Q53R41 847 aaKnown RBP23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 TDRPQ86YL5 185 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 CILP2Q8IUL8 1156 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 EDAQ92838 391 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 COQ10AQ96MF6 247 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 UHRF1Q96T88 793 aaPredicted RBP23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 FBXO5Q9UKT4 447 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 NCKAP1Q9Y2A7 1128 aa23.95■■□□□ 1.42
ATPAF1-213ENST00000574428 PSMD11O00231 422 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 TSPAN6O43657 245 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 PLRG1O43660 514 aaKnown RBP23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 RPS9P46781 194 aaKnown RBP23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 TPMTP51580 245 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 GYS2P54840 703 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 ADPRHP54922 357 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 GABPB1Q06547 395 aaPredicted RBP23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 CHRNA6Q15825 494 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 MRNIPQ6NTE8 343 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 PSAPL1Q6NUJ1 521 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 ADGRD1Q6QNK2 874 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 USP30Q70CQ3 517 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 TECPR1Q7Z6L1 1165 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 PIANPQ8IYJ0 282 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 CYP4X1Q8N118 509 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 C2CD4AQ8NCU7 369 aaPredicted RBP23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 SCAMP4Q969E2 229 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 PLEKHG4BQ96PX9 1271 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 CPNE1Q99829 537 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 FBXO6Q9NRD1 293 aaPredicted RBP23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 APPL1Q9UKG1 709 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 FZD4Q9ULV1 537 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 SLC30A1Q9Y6M5 507 aa23.94■■□□□ 1.42
ATPAF1-213ENST00000574428 PRR23AA6NEV1 266 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 WNT9AO14904 365 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 GP5P40197 560 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 MTAPQ13126 283 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 TMEM31Q5JXX7 168 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 SPEM1Q8N4L4 309 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 GOLGA6L1Q8N7Z2 621 aa23.93■■□□□ 1.42
ATPAF1-213ENST00000574428 GPR150Q8NGU9 434 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms