RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FNDC3AQ9Y2H6 1198 aaKnown RBP12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 LAMA1P25391 3075 aa12.73□□□□□ -0.37
TRAPPC1-206ENST00000573989 SCN8AQ9UQD0 1980 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 CEP250Q9BV73 2442 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 A0A0U1RQS6 177 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 NEMP2A6NFY4 417 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 CCDC188H7C350 402 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 KIF2AO00139 706 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 STX7O15400 261 aaKnown RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 FLRT2O43155 660 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 ECEL1O95672 775 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 KRT14P02533 472 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 APRTP07741 180 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 MYCLP1P12525 358 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 ETS1P14921 441 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 LPOP22079 712 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 RPL22P35268 128 aaKnown RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 SARNPP82979 210 aaKnown RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 CDK16Q00536 496 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 PPARDQ03181 441 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 CDH17Q12864 832 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 LAMB3Q13751 1172 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 FZD2Q14332 565 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 SPARCL1Q14515 664 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 PUM1Q14671 1186 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 TAF1AQ15573 450 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 PDPK2PQ6A1A2 396 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 ENPP7Q6UWV6 458 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 SYT10Q6XYQ8 523 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 CREG2Q8IUH2 290 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 TAB3Q8N5C8 712 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 PLA2G15Q8NCC3 412 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 OR2I1PQ8NGU4 316 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 PLEKHG4BQ96PX9 1271 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 C19orf43Q9BQ61 176 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 APOL2Q9BQE5 337 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 RIOK2Q9BVS4 552 aaKnown RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 SPATA16Q9BXB7 569 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 TEX101Q9BY14 249 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 IL21RQ9HBE5 538 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 EIF2B3Q9NR50 452 aaKnown RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 SMARCAL1Q9NZC9 954 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 NFKBIL1Q9UBC1 381 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 KLQ9UEF7 1012 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 OR1A2Q9Y585 309 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 SPO11Q9Y5K1 396 aa12.72□□□□□ -0.37
TRAPPC1-206ENST00000573989 TNFRSF10CO14798 259 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 USP12O75317 370 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 SUN1O94901 812 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 RASGRP1O95267 797 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 TNFP01375 233 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 CSF2P04141 144 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 NME1P15531 152 aaKnown RBP12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 JUNDP17535 347 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 EPHA8P29322 1005 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 HADHAP40939 763 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 GRK6P43250 576 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 CDK3Q00526 305 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 PPP1R7Q15435 360 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 PRAMEF14Q5SWL7 426 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 HENMT1Q5T8I9 393 aaKnown RBP12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 ADAMTSL4Q6UY14 1074 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 HEATR4Q86WZ0 1026 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 TRAM1L1Q8N609 369 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 OR56A4Q8NGH8 313 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 SETD7Q8WTS6 366 aaKnown RBP12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 SCAMP4Q969E2 229 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 FUBP1Q96AE4 644 aaKnown RBP12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 HIC2Q96JB3 615 aa12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 C16orf45Q96MC5 204 aaPredicted RBP12.71□□□□□ -0.37
TRAPPC1-206ENST00000573989 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 K7ESM1 405 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 ZSCAN5DPP0CG00 497 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 ALPPL2P10696 532 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 CTSEP14091 401 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 BPIP17213 487 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 SPAM1P38567 509 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 ID4P47928 161 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 HK3P52790 923 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 SRP54P61011 504 aaKnown RBP12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 IL9RQ01113 521 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 GPS1Q13098 491 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 OLIG2Q13516 323 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 ITGA9Q13797 1035 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 TRIP13Q15645 432 aaPredicted RBP12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 DENND5AQ6IQ26 1287 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 TTC27Q6P3X3 843 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 NYAP1Q6ZVC0 841 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 PRUNE1Q86TP1 453 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 HID1Q8IV36 788 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 NAXDQ8IW45 347 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 PHACTR4Q8IZ21 702 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 TTC30BQ8N4P2 665 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 GLIS1Q8NBF1 620 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 GPR26Q8NDV2 337 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 DTX3LQ8TDB6 740 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 RHBDD1Q8TEB9 315 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 SAP25Q8TEE9 199 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 EID2BQ96D98 161 aa12.7□□□□□ -0.38
TRAPPC1-206ENST00000573989 TBATAQ96M53 351 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms