RNA–Protein interactions for RNA: ENST00000573681.1

PRPF8-207, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-207ENST00000573681 LTBRP36941 435 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 SPAM1P38567 509 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 OPRD1P41143 372 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 GRIA2P42262 883 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 SKIV2L2P42285 1042 aaKnown RBP12.84□□□□□ -0.35
PRPF8-207ENST00000573681 SUOXP51687 545 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 IRX4P78413 519 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 DLX2Q07687 328 aaPredicted RBP12.84□□□□□ -0.35
PRPF8-207ENST00000573681 ASPHQ12797 758 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 SEMA3AQ14563 771 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 PTPRRQ15256 657 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 HNRNPA1L2Q32P51 320 aaKnown RBP12.84□□□□□ -0.35
PRPF8-207ENST00000573681 FNDC3BQ53EP0 1204 aaKnown RBP12.84□□□□□ -0.35
PRPF8-207ENST00000573681 RBM20Q5T481 1227 aaKnown RBP12.84□□□□□ -0.35
PRPF8-207ENST00000573681 KLC3Q6P597 504 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 PARM1Q6UWI2 310 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 SNX20Q7Z614 316 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 ZSWIM9Q86XI8 627 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 SUGP1Q8IWZ8 645 aaKnown RBP12.84□□□□□ -0.35
PRPF8-207ENST00000573681 RAVER1Q8IY67 606 aaKnown RBP12.84□□□□□ -0.35
PRPF8-207ENST00000573681 PHTF2Q8N3S3 785 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 TERB1Q8NA31 727 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 PPP1R14CQ8TAE6 165 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 ZNF398Q8TD17 642 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 DTX3LQ8TDB6 740 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 LPGAT1Q92604 370 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 SCYL1Q96KG9 808 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 MRPL57Q9BQC6 102 aaKnown RBP12.84□□□□□ -0.35
PRPF8-207ENST00000573681 TSSK1BQ9BXA7 367 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 GPAMQ9HCL2 828 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 COPG2Q9UBF2 871 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 ARL2BPQ9Y2Y0 163 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 PCDHB1Q9Y5F3 818 aa12.84□□□□□ -0.35
PRPF8-207ENST00000573681 GLYATL1P3A0A0U1RQE8 302 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 NPIPB15A6NHN6 443 aaPredicted RBP12.83□□□□□ -0.36
PRPF8-207ENST00000573681 NPC1O15118 1278 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 TRIM13O60858 407 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 LEFTY1O75610 366 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 ESR1P03372 595 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 APODP05090 189 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 PYGLP06737 847 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 TROVE2P10155 538 aaKnown RBP eCLIP12.83□□□□□ -0.36
PRPF8-207ENST00000573681 MYL2P10916 166 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 PKMP14618 531 aaKnown RBP12.83□□□□□ -0.36
PRPF8-207ENST00000573681 FMO4P31512 558 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 VIPR1P32241 457 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 IRF9Q00978 393 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 PTSQ03393 145 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 ARHGEF7Q14155 803 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 GRM2Q14416 872 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 ACAP2Q15057 778 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 CHI3L2Q15782 390 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 GLIPR1L2Q4G1C9 344 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 UGT3A1Q6NUS8 523 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 ZNF549Q6P9A3 640 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 FAM47EQ6ZV65 393 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 DSG4Q86SJ6 1040 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 TTC7BQ86TV6 843 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 PIAS4Q8N2W9 510 aaPredicted RBP12.83□□□□□ -0.36
PRPF8-207ENST00000573681 GRIN3AQ8TCU5 1115 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 KCTD4Q8WVF5 259 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 MYLIPQ8WY64 445 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 OR8D1Q8WZ84 308 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 SUSD6Q92537 303 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 NXPE3Q969Y0 559 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 NXNL1Q96CM4 212 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 UBXN10Q96LJ8 280 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 C7orf26Q96N11 449 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 GPR78Q96P69 363 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 NDNQ99608 321 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 OLFM1Q99784 485 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 KXD1Q9BQD3 176 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 CDH19Q9H159 772 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 POMKQ9H5K3 350 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 ASB8Q9H765 288 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 IL26Q9NPH9 171 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 THAP1Q9NVV9 213 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 ZNF358Q9NW07 568 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 TAS2R13Q9NYV9 303 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 PKD2L2Q9NZM6 624 aa12.83□□□□□ -0.36
PRPF8-207ENST00000573681 THAP10Q9P2Z0 257 aaPredicted RBP12.83□□□□□ -0.36
PRPF8-207ENST00000573681 TRBV5-4A0A0C4DH59 114 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 UBA6A0AVT1 1052 aaPredicted RBP12.82□□□□□ -0.36
PRPF8-207ENST00000573681 CCDC189A1A4V9 331 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 UPK3BL1B0FP48 263 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 UPK3BL2E5RIL1 263 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 ANHXE9PGG2 379 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 H3BMM5 538 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 RHOBTB1O94844 696 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 KAT7O95251 611 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 WISP3O95389 354 aaPredicted RBP12.82□□□□□ -0.36
PRPF8-207ENST00000573681 TOP3BO95985 862 aaKnown RBP12.82□□□□□ -0.36
PRPF8-207ENST00000573681 SERPINE1P05121 402 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 RALBP11234 206 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 ZNF7P17097 686 aaPredicted RBP12.82□□□□□ -0.36
PRPF8-207ENST00000573681 BPIP17213 487 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 TNFRSF4P43489 277 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 RGS19P49795 217 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 CDKN2DP55273 166 aa12.82□□□□□ -0.36
PRPF8-207ENST00000573681 KDSRQ06136 332 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms