RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 CES3Q6UWW8 571 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ZNF765Q7L2R6 523 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 PTAR1Q7Z6K3 402 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 TECPR1Q7Z6L1 1165 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 CCNJLQ8IV13 435 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ANKMY2Q8IV38 441 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 CBARPQ8N350 705 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 MPP5Q8N3R9 675 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 TRAM1L1Q8N609 369 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 TP53I13Q8NBR0 393 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 OR6P1Q8NGX9 317 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 SCAMP4Q969E2 229 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 SKA1Q96BD8 255 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ZNF669Q96BR6 464 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 EID2BQ96D98 161 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 LRRC39Q96DD0 335 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ZC3H10Q96K80 434 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 LENG8Q96PV6 779 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 PLEKHG4BQ96PX9 1271 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 FMO2Q99518 471 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 EBNA1BP2Q99848 306 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 NAT9Q9BTE0 207 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ZSCAN5AQ9BUG6 496 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 KIFC1Q9BW19 673 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 SPATA16Q9BXB7 569 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 TSPYL1Q9H0U9 437 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ABCG8Q9H221 673 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 EPC1Q9H2F5 836 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 WDR26Q9H7D7 661 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 MRM3Q9HC36 420 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 SAYSD1Q9NPB0 183 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 MBNL1Q9NR56 388 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 NLE1Q9NVX2 485 aaPredicted RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 ZC3H7BQ9UGR2 993 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 SUSD2Q9UGT4 822 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 FKBPLQ9UIM3 349 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 NFU1Q9UMS0 254 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 SOX13Q9UN79 622 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 SMG5Q9UPR3 1016 aaKnown RBP9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 CHMP2BQ9UQN3 213 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 CA5BQ9Y2D0 317 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 SLC30A1Q9Y6M5 507 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 RPS6KL1Q9Y6S9 549 aa9.41□□□□□ -0.9
NPLOC4-208ENST00000572351 FAM237BA0A1B0GVD1 139 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 A6NNZ2 444 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 PRR5-ARHGAP8B1AHC4 643 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 CACNB4O00305 520 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 TP73O15350 636 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 EIF3HO15372 352 aaKnown RBP eCLIP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 BCAT2O15382 392 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 TTC4O95801 387 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 TSHRP16473 764 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 GM2AP17900 193 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 MCM3P25205 808 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 NMBRP28336 390 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 AFF3P51826 1226 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 THOP1P52888 689 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 C21orf59P57076 290 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 DCDC1P59894 354 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 RACK1P63244 317 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 DPTQ07507 201 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 ITGA9Q13797 1035 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 INPP5AQ14642 412 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 AGERQ15109 404 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 CHRNA6Q15825 494 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 ERCC6LQ2NKX8 1250 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 ZRANB3Q5FWF4 1079 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 ESRP1Q6NXG1 681 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 PNCKQ6P2M8 343 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 AFTPHQ6ULP2 937 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 TAS2R42Q7RTR8 314 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 PALM2Q8IXS6 379 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 GPR26Q8NDV2 337 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 FBXO36Q8NEA4 188 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 GDAP1Q8TB36 358 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 PYROXD1Q8WU10 500 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 DNASE2BQ8WZ79 361 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 RUBCNQ92622 972 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 PEX13Q92968 403 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 CENPTQ96BT3 561 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 MFSD3Q96ES6 412 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 CDKN2AIPNLQ96HQ2 116 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 SIGLEC10Q96LC7 697 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 TBATAQ96M53 351 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 DCBLD2Q96PD2 775 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 AGAP2Q99490 1192 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 SEMA4AQ9H3S1 761 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 ASB8Q9H765 288 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 SUDS3Q9H7L9 328 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 EBF2Q9HAK2 575 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 TM9SF3Q9HD45 589 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 IL26Q9NPH9 171 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 PPANQ9NQ55 473 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 PHPT1Q9NRX4 125 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 ZDHHC18Q9NUE0 388 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 FAM86C1Q9NVL1 165 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 SLC2A6Q9UGQ3 507 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 CRLS1Q9UJA2 301 aa9.4□□□□□ -0.9
NPLOC4-208ENST00000572351 GMEB2Q9UKD1 530 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms