RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 CALCOCO2Q13137 446 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 CBLBQ13191 982 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 MPP3Q13368 585 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 PRPSAP1Q14558 356 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 HNRNPA1L2Q32P51 320 aaKnown RBP13.79□□□□□ -0.2
RPAIN-209ENST00000571558 ACCSLQ4AC99 568 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 CARD16Q5EG05 197 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 ZNF534Q76KX8 674 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 SRLQ86TD4 932 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 MCUQ8NE86 351 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 GANCQ8TET4 914 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 IFT81Q8WYA0 676 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 PTPRN2Q92932 1015 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 GDAP1L1Q96MZ0 367 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 AASDHPPTQ9NRN7 309 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 FAM153AQ9UHL3 310 aa13.79□□□□□ -0.2
RPAIN-209ENST00000571558 A0A1W2PR77 199 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 SMAPO00193 183 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 NDC80O14777 642 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 PSMD3O43242 534 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 PMPCBO75439 489 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 DXOO77932 396 aaKnown RBP13.78□□□□□ -0.2
RPAIN-209ENST00000571558 IGSF6O95976 241 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 WNT1P04628 370 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 TUBBP07437 444 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 NUDT1P36639 197 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 NNMTP40261 264 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 GRIA1P42261 906 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 PLTPP55058 493 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 WNT3AP56704 352 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 CLDN6P56747 220 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 NXPH1P58417 271 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 ERVPABLB-1P60509 514 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 SNRPD1P62314 119 aaKnown RBP13.78□□□□□ -0.2
RPAIN-209ENST00000571558 OLIG2Q13516 323 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 MYLK3Q32MK0 819 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 PRAMEF14Q5SWL7 426 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 C9orf64Q5T6V5 341 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 DENND5AQ6IQ26 1287 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 DPY19L3Q6ZPD9 716 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 IQCHQ86VS3 1027 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 ZNF366Q8N895 744 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 OR6K2Q8NGY2 324 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 HIC2Q96JB3 615 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 TRIB3Q96RU7 358 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 DPH1Q9BZG8 443 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 MTG2Q9H4K7 406 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 LRRC40Q9H9A6 602 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 HECAQ9UBI9 543 aaPredicted RBP13.78□□□□□ -0.2
RPAIN-209ENST00000571558 NFU1Q9UMS0 254 aa13.78□□□□□ -0.2
RPAIN-209ENST00000571558 EDDM13A0A1B0GTR0 161 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 LOC285095A0A1B0GVY8 99 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 FAM47DPA6NHR8 397 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 E7EVH7 732 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 GKP32189 559 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 MAGEA3P43357 314 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 CCNHP51946 323 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-209ENST00000571558 INSM1Q01101 510 aaPredicted RBP13.77□□□□□ -0.21
RPAIN-209ENST00000571558 TRAF2Q12933 501 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 SPARCL1Q14515 664 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 CST6Q15828 149 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 RANBP10Q6VN20 620 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 CAND1Q86VP6 1230 aaKnown RBP13.77□□□□□ -0.21
RPAIN-209ENST00000571558 MFSD2AQ8NA29 543 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 CHST14Q8NCH0 376 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 FEM1CQ96JP0 617 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 PWWP2AQ96N64 755 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 OMDQ99983 421 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 TDRD1Q9BXT4 1180 aaKnown RBP13.77□□□□□ -0.21
RPAIN-209ENST00000571558 CPEB1Q9BZB8 566 aaKnown RBP13.77□□□□□ -0.21
RPAIN-209ENST00000571558 EBF2Q9HAK2 575 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 ARNT2Q9HBZ2 717 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 PCDHGC4Q9Y5F7 938 aa13.77□□□□□ -0.21
RPAIN-209ENST00000571558 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-209ENST00000571558 GOLGA6CA6NDK9 693 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 GOLGA6BA6NDN3 693 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 TRAFD1O14545 582 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-209ENST00000571558 HTRA2O43464 458 aaPredicted RBP13.76□□□□□ -0.21
RPAIN-209ENST00000571558 LATO43561 262 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 FZD6O60353 706 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 USP12O75317 370 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 POP4O95707 220 aaKnown RBP13.76□□□□□ -0.21
RPAIN-209ENST00000571558 AGTP01019 485 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 PRLP01236 227 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 EPOP01588 193 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 GOLGA6DP0CG33 693 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 MLNP12872 115 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 MCM3P25205 808 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 KANSL1Q7Z3B3 1105 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 GSPT2Q8IYD1 628 aaKnown RBP13.76□□□□□ -0.21
RPAIN-209ENST00000571558 IPMKQ8NFU5 416 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.76□□□□□ -0.212e-7■■■■■ 32.7
RPAIN-209ENST00000571558 SPOCK2Q92563 424 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 SERAC1Q96JX3 654 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 SERPINB12Q96P63 405 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 TUBGCP5Q96RT8 1024 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 TBL1YQ9BQ87 522 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 FICDQ9BVA6 458 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 CASS4Q9NQ75 786 aa13.76□□□□□ -0.21
RPAIN-209ENST00000571558 GOLGA6AQ9NYA3 693 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms