RNA–Protein interactions for RNA: ENST00000571043.5

RPAIN-208, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,547 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-208ENST00000571043 TCF12Q99081 682 aa17.31■□□□□ 0.36
RPAIN-208ENST00000571043 NDNQ99608 321 aa17.31■□□□□ 0.36
RPAIN-208ENST00000571043 POPDC3Q9HBV1 291 aa17.31■□□□□ 0.36
RPAIN-208ENST00000571043 SLC40A1Q9NP59 571 aa17.31■□□□□ 0.36
RPAIN-208ENST00000571043 IGSF5Q9NSI5 407 aa17.31■□□□□ 0.36
RPAIN-208ENST00000571043 ABCB8Q9NUT2 735 aa17.31■□□□□ 0.36
RPAIN-208ENST00000571043 MARK1Q9P0L2 795 aa17.31■□□□□ 0.36
RPAIN-208ENST00000571043 CPSF2Q9P2I0 782 aaKnown RBP17.31■□□□□ 0.36
RPAIN-208ENST00000571043 RPL26L1Q9UNX3 145 aaKnown RBP17.31■□□□□ 0.36
RPAIN-208ENST00000571043 TCF20Q9UGU0 1960 aaKnown RBP17.3■□□□□ 0.36
RPAIN-208ENST00000571043 TK2O00142 265 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 RASSF9O75901 435 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 WISP3O95389 354 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-208ENST00000571043 NFATC1O95644 943 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 MT-CO1P00395 513 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 PENKP01210 267 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-208ENST00000571043 KITP10721 976 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 ALOX15P16050 662 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-208ENST00000571043 SERPINB3P29508 390 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 GDI1P31150 447 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 RASSF2P50749 326 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 STC1P52823 247 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 PTPRCAPQ14761 206 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 KRT72Q14CN4 511 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 SLC44A3Q8N4M1 653 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 ZNF557Q8N988 423 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-208ENST00000571043 OR4K2Q8NGD2 314 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 HEXDCQ8WVB3 486 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 BHMTQ93088 406 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 GATA5Q9BWX5 397 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-208ENST00000571043 EBF3Q9H4W6 596 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 GPAMQ9HCL2 828 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 HPS4Q9NQG7 708 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 ARHGEF3Q9NR81 526 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 XPR1Q9UBH6 696 aa17.3■□□□□ 0.36
RPAIN-208ENST00000571043 MARCOQ9UEW3 520 aaPredicted RBP17.3■□□□□ 0.36
RPAIN-208ENST00000571043 ARNTLO00327 626 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 CCDC22O60826 627 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 RBP1P09455 135 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 LTA4HP09960 611 aaKnown RBP17.29■□□□□ 0.36
RPAIN-208ENST00000571043 ARSAP15289 507 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 NQO1P15559 274 aaKnown RBP17.29■□□□□ 0.36
RPAIN-208ENST00000571043 FDXRP22570 491 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 PMLP29590 882 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 ARRB2P32121 409 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 GRIA4P48058 902 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 GLRBP48167 497 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 SUOXP51687 545 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 PGGT1BP53609 377 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 ARMC12Q5T9G4 340 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 KLC3Q6P597 504 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 NAPRTQ6XQN6 538 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 LDB1Q86U70 411 aaPredicted RBP17.29■□□□□ 0.36
RPAIN-208ENST00000571043 ADHFE1Q8IWW8 467 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 TTC30BQ8N4P2 665 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.29■□□□□ 0.36
RPAIN-208ENST00000571043 INPP5DQ92835 1189 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 UBXN10Q96LJ8 280 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 C19orf43Q9BQ61 176 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 DRC3Q9H069 523 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 MAGEE1Q9HCI5 957 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 DNAJC28Q9NX36 388 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 CLEC4EQ9ULY5 219 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 VPS9D1Q9Y2B5 631 aa17.29■□□□□ 0.36
RPAIN-208ENST00000571043 OTOL1A6NHN0 477 aaPredicted RBP17.28■□□□□ 0.36
RPAIN-208ENST00000571043 H7C0S8 307 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 K7ERQ8 282 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 FCHO1O14526 889 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 TRAFD1O14545 582 aaPredicted RBP17.28■□□□□ 0.36
RPAIN-208ENST00000571043 DLX3O60479 287 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 SOCS5O75159 536 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 SNUPNO95149 360 aaKnown RBP17.28■□□□□ 0.36
RPAIN-208ENST00000571043 PGLSO95336 258 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 HSPA4LO95757 839 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 CYP17A1P05093 508 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 T-ENOLP0DO92 83 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 SLC8A1P32418 973 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 CD70P32970 193 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 ABL2P42684 1182 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 HK2P52789 917 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 DNAJB13P59910 316 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 RUNX3Q13761 415 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 SEMA3AQ14563 771 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 ACAP2Q15057 778 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 TECRLQ5HYJ1 363 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 ATXN7L2Q5T6C5 722 aaPredicted RBP17.28■□□□□ 0.36
RPAIN-208ENST00000571043 ATG14Q6ZNE5 492 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 PDCD6IPQ8WUM4 868 aaKnown RBP17.28■□□□□ 0.36
RPAIN-208ENST00000571043 CCDC126Q96EE4 140 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 MYO19Q96H55 970 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 AARSD1Q9BTE6 412 aaKnown RBP17.28■□□□□ 0.36
RPAIN-208ENST00000571043 BBS2Q9BXC9 721 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 LRMDAQ9H2I8 198 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 PLK2Q9NYY3 685 aa17.28■□□□□ 0.36
RPAIN-208ENST00000571043 INTS6Q9UL03 887 aaKnown RBP17.28■□□□□ 0.36
RPAIN-208ENST00000571043 PFDN6O15212 129 aa17.27■□□□□ 0.36
RPAIN-208ENST00000571043 STX7O15400 261 aaKnown RBP17.27■□□□□ 0.36
RPAIN-208ENST00000571043 HOXC11O43248 304 aaPredicted RBP17.27■□□□□ 0.36
RPAIN-208ENST00000571043 HTRA2O43464 458 aaPredicted RBP17.27■□□□□ 0.36
RPAIN-208ENST00000571043 SMAD6O43541 496 aaKnown RBP17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms