RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 LRRN3Q9H3W5 708 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CARS2Q9HA77 564 aaKnown RBP17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PCDH9Q9HC56 1237 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SIRPGQ9P1W8 387 aa17.03■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ITGA2BP08514 1039 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 EPHB1P54762 984 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 UCNP55089 124 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PDK1Q15118 436 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 PTPRRQ15256 657 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SOWAHCQ53LP3 525 aaPredicted RBP17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 C3orf38Q5JPI3 329 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 DENND2CQ68D51 928 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SPRED1Q7Z699 444 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CCNJLQ8IV13 435 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ARL14Q8N4G2 192 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CNTD1Q8N815 330 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 LSM14AQ8ND56 463 aaKnown RBP17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CCNYQ8ND76 341 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CCL4L1Q8NHW4 92 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TADA1Q96BN2 335 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 TMEM74Q96NL1 305 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 LGMNQ99538 433 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ANP32EQ9BTT0 268 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ACSL6Q9UKU0 697 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 SUFUQ9UMX1 484 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 CHKBQ9Y259 395 aa17.02■□□□□ 0.32
MAP1LC3B-208ENST00000570189 ATRXP46100 2492 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ANKRD66B4E2M5 251 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 APOL1O14791 398 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 JCHAINP01591 159 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RPLP0P05388 317 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RBMS1P29558 406 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GPR1P46091 355 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 NR2C2P49116 596 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CCL7P80098 99 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ZFP36L1Q07352 338 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ZBTB17Q13105 803 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 LRP8Q14114 963 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ZFYVE27Q5T4F4 411 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TC2NQ8N9U0 490 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 EXD1Q8NHP7 514 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SNRNP27Q8WVK2 155 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TMEM159Q96B96 161 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CCDC97Q96F63 343 aaPredicted RBP17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 IMP4Q96G21 291 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TRIB3Q96RU7 358 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ADGRE3Q9BY15 652 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CDH19Q9H159 772 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 DPEP2Q9H4A9 486 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SPATS2LQ9NUQ6 558 aaKnown RBP17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TAAR2Q9P1P5 351 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 VPS18Q9P253 973 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 NFKBIL1Q9UBC1 381 aaPredicted RBP17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PCDHGA7Q9Y5G6 932 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ST14Q9Y5Y6 855 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 MGAQ8IWI9 3026 aa17.01■□□□□ 0.31
MAP1LC3B-208ENST00000570189 KCNK1O00180 336 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PPP1R12AO14974 1030 aaPredicted RBP17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CASC3O15234 703 aaKnown RBP17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PSTPIP1O43586 416 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 FGF1P05230 155 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GPR3P46089 330 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 B4GALNT1Q00973 533 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SQSTM1Q13501 440 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 QPCTQ16769 361 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 HENMT1Q5T8I9 393 aaKnown RBP17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RFLNAQ6ZTI6 216 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 BZW1Q7L1Q6 419 aaKnown RBP17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RNF214Q8ND24 703 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SCAMP4Q969E2 229 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CRELD1Q96HD1 420 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SMIM14Q96QK8 99 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 WDR24Q96S15 920 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 UBL7Q96S82 380 aaPredicted RBP17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 MLPHQ9BV36 600 aaPredicted RBP17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 MAK16Q9BXY0 300 aaKnown RBP17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 STRADBQ9C0K7 418 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SLC25A51Q9H1U9 297 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 LRIT1Q9P2V4 623 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TTLL3Q9Y4R7 772 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 HEY1Q9Y5J3 304 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 RNF215Q9Y6U7 377 aa17■□□□□ 0.31
MAP1LC3B-208ENST00000570189 A0A0A6YYK5 440 aaPredicted RBP16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TEX51A0A1B0GUA7 166 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 B4DGG1 531 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 TK2O00142 265 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 PLD2O14939 933 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ZW10O43264 779 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CLDN7O95471 211 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 KRT1P04264 644 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 HOXB3P14651 431 aaPredicted RBP16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 COMTP21964 271 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 ADCY8P40145 1251 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CD86P42081 329 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CDKN2BP42772 138 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 GNPDA1P46926 289 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 SPINT3P49223 89 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 INHBCP55103 352 aa16.99■□□□□ 0.31
MAP1LC3B-208ENST00000570189 CTBSQ01459 385 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms