RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 LRRC61Q9BV99 259 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 ZFYVE1Q9HBF4 777 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 PKD2L2Q9NZM6 624 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 RSPH14Q9UHP6 348 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 NEUROG3Q9Y4Z2 214 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 UNC13CQ8NB66 2214 aa13.78□□□□□ -0.2
HERPUD1-218ENST00000569569 FAM221BA6H8Z2 402 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 LMO7DNF2Z398 122 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 KCNN4O15554 427 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 RFPL3O75679 317 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 STK10O94804 968 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 ANXA6P08133 673 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 SPINK2P20155 84 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 ACADVLP49748 655 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 DUSP3P51452 185 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 WNT3AP56704 352 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 CDK3Q00526 305 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 ILKQ13418 452 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 RPS6KA1Q15418 735 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 DEFB133Q30KQ1 61 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 CCDC157Q569K6 752 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 ANKRD20A2Q5SQ80 823 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 SEL1L2Q5TEA6 688 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 ANKRD20A1Q5TYW2 823 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 ANKRD20A3Q5VUR7 823 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 ZCCHC8Q6NZY4 707 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 KDELC1Q6UW63 502 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 LYSMD3Q7Z3D4 306 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 TMC3Q7Z5M5 1100 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 SCG3Q8WXD2 468 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 SCAMP4Q969E2 229 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 MRGPRX2Q96LB1 330 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 CLPBQ9H078 707 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 FAM83DQ9H4H8 585 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 USP29Q9HBJ7 922 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 FGF22Q9HCT0 170 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 MRPL40Q9NQ50 206 aaKnown RBP13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 PLSCR2Q9NRY7 297 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 EVA1BQ9NVM1 165 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 DOLKQ9UPQ8 538 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 PPP2R2CQ9Y2T4 447 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 MSRB2Q9Y3D2 182 aa13.77□□□□□ -0.21
HERPUD1-218ENST00000569569 ACACBO00763 2458 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 YY2O15391 372 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 ANXA9O76027 345 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 SOD1P00441 154 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 PIRTP0C851 137 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 CKMT1AP12532 417 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 GEMP55040 296 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 DHRS13Q6UX07 377 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 ADAMTSL4Q6UY14 1074 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 NYAP1Q6ZVC0 841 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 TMPRSS7Q7RTY8 843 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 GKN2Q86XP6 184 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 GALNT15Q8N3T1 639 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 TRIM58Q8NG06 486 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 OR1E3Q8WZA6 343 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 GLMNQ92990 594 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 EID2BQ96D98 161 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 PDXPQ96GD0 296 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 OXNAD1Q96HP4 312 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 RIOK2Q9BVS4 552 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 GPR63Q9BZJ6 419 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 CDH19Q9H159 772 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 GBA3Q9H227 469 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 CYP4F12Q9HCS2 524 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 NCKIPSDQ9NZQ3 722 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 MOSPD1Q9UJG1 213 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 KLK13Q9UKR3 277 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 SHOC2Q9UQ13 582 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 AAR2Q9Y312 384 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 ZNF711Q9Y462 761 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 CHD8Q9HCK8 2581 aa13.76□□□□□ -0.21
HERPUD1-218ENST00000569569 PRSS38A1L453 326 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 C5orf60A6NFR6 353 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 F5H423 210 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 CEACAM5P06731 702 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 HLA-DPA1P20036 260 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 E2F1Q01094 437 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 PRPSAP1Q14558 356 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 SLC1A5Q15758 541 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 SMAD1Q15797 465 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 SIRPB2Q5JXA9 342 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 C6orf132Q5T0Z8 1188 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 HENMT1Q5T8I9 393 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 KCTD16Q68DU8 428 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 IPMKQ8NFU5 416 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 SLC35B2Q8TB61 432 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 ANP32BQ92688 251 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 HIC2Q96JB3 615 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 SPATA13Q96N96 652 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 PPP1R2P1Q96PQ5 205 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 WDR24Q96S15 920 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 AGAP2Q99490 1192 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 BOCQ9BWV1 1114 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 FSD1LQ9BXM9 530 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 FRMD8Q9BZ67 464 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 CARD9Q9H257 536 aa13.75□□□□□ -0.21
HERPUD1-218ENST00000569569 TRABDQ9H4I3 376 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms