RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 SPOCD1Q6ZMY3 1216 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 BEND5Q7L4P6 421 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 SETD3Q86TU7 594 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 RAB43Q86YS6 212 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 C12orf56Q8IXR9 622 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 DMRTC2Q8IXT2 367 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 TTC39CQ8N584 583 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 ENDOVQ8N8Q3 282 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 ACRBPQ8NEB7 543 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 RASSF8Q8NHQ8 419 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 KLHL6Q8WZ60 621 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 MR1Q95460 341 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 COX4I2Q96KJ9 171 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 LRFN5Q96NI6 719 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 NLNQ9BYT8 704 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 TM6SF2Q9BZW4 377 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 NIF3L1Q9GZT8 377 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 CHST8Q9H2A9 424 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 ZNF395Q9H8N7 513 aaPredicted RBP6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 APOBEC3GQ9HC16 384 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 WASH6PQ9NQA3 447 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 TSPAN16Q9UKR8 245 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 RARRES3Q9UL19 164 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 VANGL2Q9ULK5 521 aa6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 KMT2CQ8NEZ4 4911 aaKnown RBP6.56□□□□□ -1.36
HERPUD1-217ENST00000569429 TRRAPQ9Y4A5 3859 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 CFAP69A5D8W1 941 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 IKBKBO14920 756 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 BUB1BO60566 1050 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 ZWINTO95229 277 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 POP4O95707 220 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 HLA-DRAP01903 254 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 CEACAM5P06731 702 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 SETSIPP0DME0 302 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 ERCC5P28715 1186 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 ADCY8P40145 1251 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 ACTR1BP42025 376 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 GFERP55789 205 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 ACTR1AP61163 376 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 ARF5P84085 180 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 GPS2Q13227 327 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 PRKD1Q15139 912 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 ANKRD1Q15327 319 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 E2F4Q16254 413 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 INAQ16352 499 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 C3AR1Q16581 482 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 GOLGA7BQ2TAP0 167 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 GDPD4Q6W3E5 623 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 PRSS42Q7Z5A4 293 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 KRTAP1-3Q8IUG1 177 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC9A9Q8IVB4 645 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 OR6K2Q8NGY2 324 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 ZNF507Q8TCN5 953 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 CLEC4CQ8WTT0 213 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 HMCESQ96FZ2 354 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 FAXDC2Q96IV6 333 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 IMPG2Q9BZV3 1241 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 STN1Q9H668 368 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 WDR26Q9H7D7 661 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 NDFIP2Q9NV92 336 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 PANK4Q9NVE7 773 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 STMN3Q9NZ72 180 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 HESX1Q9UBX0 185 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 STK17AQ9UEE5 414 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 SUFUQ9UMX1 484 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 MEMO1Q9Y316 297 aa6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 FCF1Q9Y324 198 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 PRKDCP78527 4128 aaKnown RBP6.55□□□□□ -1.36
HERPUD1-217ENST00000569429 TRBV23OR9-2A0A075B6M9 112 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 CCDC78A2IDD5 438 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 LILRA5A6NI73 299 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 KRIT1O00522 736 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 SPRY1O43609 319 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC19A2O60779 497 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 CUTAO60888 179 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 CPNE3O75131 537 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 CTAG2O75638 210 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 FBXO21O94952 628 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 ADCY5O95622 1261 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 TRUB2O95900 331 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 CD160O95971 181 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 GSRP00390 522 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 IFNA2P01563 188 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 KLK3P07288 261 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 CAPN1P07384 714 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 IVLP07476 585 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 SLC2A3P11169 496 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 MYCLP1P12525 358 aaPredicted RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 NELFEP18615 380 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 LONP1P36776 959 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 PIK3CAP42336 1068 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 MAPK9P45984 424 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 GNPDA1P46926 289 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 LIG3P49916 1009 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 GSDMDP57764 484 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 SNRPD1P62314 119 aaKnown RBP6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 MTA1Q13330 715 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 NFATC2Q13469 925 aa6.54□□□□□ -1.36
HERPUD1-217ENST00000569429 KCNAB1Q14722 419 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms