RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 NRSN1Q8IZ57 195 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 PDCD7Q8N8D1 485 aaKnown RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 OR56A4Q8NGH8 313 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 SAP25Q8TEE9 199 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 BTN2A2Q8WVV5 523 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 MAGOHBQ96A72 148 aaKnown RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 PDXPQ96GD0 296 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 WDR24Q96S15 920 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 NAPGQ99747 312 aaPredicted RBP12.77□□□□□ -0.37
CDT1-203ENST00000569140 LGR4Q9BXB1 951 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 FAM83DQ9H4H8 585 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 LRRC40Q9H9A6 602 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 GPR27Q9NS67 375 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 RAD18Q9NS91 495 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 HOMER3Q9NSC5 361 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 UCKL1Q9NWZ5 548 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 HACD3Q9P035 362 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 PAK5Q9P286 719 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 FTSJ1Q9UET6 329 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 PKP3Q9Y446 797 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 LAMA1P25391 3075 aa12.77□□□□□ -0.37
CDT1-203ENST00000569140 CTAGE9A4FU28 777 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 PDE2AO00408 941 aaPredicted RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 PSMD3O43242 534 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 ASMTLO95671 621 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 TNFP01375 233 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 CSF2P04141 144 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 ALPPL2P10696 532 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 TCP1P17987 556 aaKnown RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 DGKAP23743 735 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 FDFT1P37268 417 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 VPS41P49754 854 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 BLKP51451 505 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 BASP1P80723 227 aaKnown RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 SIM1P81133 766 aaPredicted RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 C1orf61Q13536 156 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 SEPT6Q14141 434 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 TRIP13Q15645 432 aaPredicted RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 CDKN3Q16667 212 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 KCTD19Q17RG1 926 aaPredicted RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 ALG11Q2TAA5 492 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 PPP1R21Q6ZMI0 780 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 NYAP1Q6ZVC0 841 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 ZNF765Q7L2R6 523 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 TMC3Q7Z5M5 1100 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 PIP4P1Q86T03 277 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 RASGEF1CQ8N431 466 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 ZNF548Q8NEK5 533 aaPredicted RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 RTP4Q96DX8 246 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 AGAP2Q99490 1192 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 TCEAL2Q9H3H9 227 aaPredicted RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 TRABDQ9H4I3 376 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 CYP4F12Q9HCS2 524 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 MRPL40Q9NQ50 206 aaKnown RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 RAB6BQ9NRW1 208 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 PIH1D1Q9NWS0 290 aaKnown RBP12.76□□□□□ -0.37
CDT1-203ENST00000569140 SPASTQ9UBP0 616 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 KLF15Q9UIH9 416 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 PCOLCE2Q9UKZ9 415 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 CFAP54Q96N23 3096 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 GVINP1Q7Z2Y8 2422 aa12.76□□□□□ -0.37
CDT1-203ENST00000569140 PRSS38A1L453 326 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 NEMP2A6NFY4 417 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 TMEM202A6NGA9 273 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 TM4SF5O14894 197 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 STX7O15400 261 aaKnown RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 AQP9O43315 295 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 LDOC1O95751 146 aaPredicted RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 GAS8O95995 478 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 PYGLP06737 847 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 CEACAM1P13688 526 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 ADRA1AP35348 466 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 GNPDA1P46926 289 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 DPTQ07507 201 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 TRIP6Q15654 476 aaKnown RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 DEFB133Q30KQ1 61 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 DRICH1Q6PGQ1 229 aaPredicted RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 MARK2Q7KZI7 788 aaKnown RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 CBARPQ8N350 705 aaPredicted RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 PRELID2Q8N945 189 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 DNAAF3Q8N9W5 541 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 GLIS1Q8NBF1 620 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 GPR26Q8NDV2 337 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 GDAP1Q8TB36 358 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 OR1E3Q8WZA6 343 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 TRIM44Q96DX7 344 aaPredicted RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 HIC2Q96JB3 615 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 CNDP2Q96KP4 475 aaKnown RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 CDC6Q99741 560 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 TEX101Q9BY14 249 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 CARS2Q9HA77 564 aaKnown RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 ETNK1Q9HBU6 452 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 FGF22Q9HCT0 170 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 ARFGAP3Q9NP61 516 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 DRG1Q9Y295 367 aaKnown RBP12.75□□□□□ -0.37
CDT1-203ENST00000569140 TMEM98Q9Y2Y6 226 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 ARL5AQ9Y689 179 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 PIEZO1Q92508 2521 aa12.75□□□□□ -0.37
CDT1-203ENST00000569140 DMXL1Q9Y485 3027 aa12.74□□□□□ -0.37
CDT1-203ENST00000569140 ZNF292O60281 2723 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms