RNA–Protein interactions for RNA: ENST00000568559.1

TMEM170A-205, Transcript of transmembrane protein 170A, humanhuman

TSL 1 (best)

Gene TMEM170A, Length 4,345 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM170A-205ENST00000568559 RBFAQ8N0V3 343 aa12.13□□□□□ -0.47
TMEM170A-205ENST00000568559 CPXM2Q8N436 756 aa12.13□□□□□ -0.47
TMEM170A-205ENST00000568559 TMEM159Q96B96 161 aa12.13□□□□□ -0.47
TMEM170A-205ENST00000568559 CENPTQ96BT3 561 aa12.13□□□□□ -0.47
TMEM170A-205ENST00000568559 ACE2Q9BYF1 805 aaPredicted RBP12.13□□□□□ -0.47
TMEM170A-205ENST00000568559 NDRG2Q9UN36 371 aaKnown RBP12.13□□□□□ -0.47
TMEM170A-205ENST00000568559 TRIM33Q9UPN9 1127 aa12.13□□□□□ -0.47
TMEM170A-205ENST00000568559 PSAT1Q9Y617 370 aa12.13□□□□□ -0.47
TMEM170A-205ENST00000568559 PRMT5O14744 637 aaPredicted RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 GYG2O15488 501 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 PRPF4O43172 522 aaKnown RBP eCLIP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 TULP3O75386 442 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 RNASEH2AO75792 299 aaKnown RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 SLC25A14O95258 325 aaPredicted RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 DNTTP04053 509 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 PSMC3P17980 439 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 PRKCHP24723 683 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 HMOX2P30519 316 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 SLC1A6P48664 564 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 NAGLUP54802 743 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 ZNF460Q14592 562 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 CYTH1Q15438 398 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 DBN1Q16643 649 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 ITPRIPL2Q3MIP1 535 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 MMAAQ8IVH4 418 aaKnown RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 ERP27Q96DN0 273 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 NUF2Q9BZD4 464 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 ZCCHC2Q9C0B9 1178 aaKnown RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 MRPL46Q9H2W6 279 aaKnown RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 FAM83DQ9H4H8 585 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 XPR1Q9UBH6 696 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 GNPTGQ9UJJ9 305 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 ERVW-1Q9UQF0 538 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 GNGT2O14610 69 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 SMAD6O43541 496 aaKnown RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 CLDN7O95471 211 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 ENO3P13929 434 aaPredicted RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 EPB42P16452 691 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 GRAMD1BQ3KR37 738 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 MRPL38Q96DV4 380 aaKnown RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 SLCO1B3Q9NPD5 702 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 IL36AQ9UHA7 158 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 PLLPQ9Y342 182 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 IGLV3-10A0A075B6K4 115 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 AIM2O14862 343 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 PKMP14618 531 aaKnown RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 ARSAP15289 507 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 HOXA9P31269 272 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 GRIA4P48058 902 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 TAS2R39P59534 338 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 CACNG1Q06432 222 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 MANEALQ5VSG8 457 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 LILRA6Q6PI73 481 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 RANBP10Q6VN20 620 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 MTSS1LQ765P7 747 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 FBXO39Q8N4B4 442 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 SNX31Q8N9S9 440 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 ATXN2LQ8WWM7 1075 aaKnown RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 RAD18Q9NS91 495 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 GDE1Q9NZC3 331 aa12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 YBX2Q9Y2T7 364 aaKnown RBP12.12□□□□□ -0.47
TMEM170A-205ENST00000568559 H3BMM5 538 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TPST1O60507 370 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 CCDC22O60826 627 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 KATNA1O75449 491 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 PDHA1P08559 390 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 AQP5P55064 265 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 MPP7Q5T2T1 576 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TRMT11Q7Z4G4 463 aaKnown RBP12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 MIER2Q8N344 545 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 SCHIP1Q9P0W5 487 aaPredicted RBP12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 DOLKQ9UPQ8 538 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 AHSGP02765 367 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 UGT1A6P19224 532 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 UGT1A1P22309 533 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 UGT1A4P22310 534 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 HOXD9P28356 352 aaPredicted RBP12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 UGT1A3P35503 534 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 UGT1A5P35504 534 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 CCR2P41597 374 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 CTSOP43234 321 aaPredicted RBP12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TNK2Q07912 1038 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TRAF2Q12933 501 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 RUNX3Q13761 415 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 PDK4Q16654 411 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 FAM78AQ5JUQ0 283 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 SLC22A9Q8IVM8 553 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 NKAPQ8N5F7 415 aaKnown RBP12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 PIP4K2CQ8TBX8 421 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 NXNL1Q96CM4 212 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TDRD1Q9BXT4 1180 aaKnown RBP12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 POMKQ9H5K3 350 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 THAP1Q9NVV9 213 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 PACSIN3Q9UKS6 424 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 NUP205Q92621 2012 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TBC1D3DA0A087WVF3 549 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TBC1D3IA0A087WXS9 549 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TBC1D3EA0A087X179 549 aa12.11□□□□□ -0.47
TMEM170A-205ENST00000568559 TBC1D3KA0A087X1G2 549 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms