RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 C14orf28Q4W4Y0 310 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 OGFOD3Q6PK18 319 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 DOK6Q6PKX4 331 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 MFSD7Q6UXD7 560 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 NPNTQ6UXI9 565 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 ADAMTSL4Q6UY14 1074 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 RFLNAQ6ZTI6 216 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 PDZD3Q86UT5 571 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 NLRP8Q86W28 1048 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 CCDC170Q8IYT3 715 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 NRSN1Q8IZ57 195 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 CCL4L1Q8NHW4 92 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 KIAA1524Q8TCG1 905 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 SCAMP4Q969E2 229 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 ATXN7L3BQ96GX2 97 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 ZNF578Q96N58 590 aaPredicted RBP14.39□□□□□ -0.11
CMTM3-215ENST00000568477 OLFM3Q96PB7 478 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 LYSMD1Q96S90 227 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 ADGRE3Q9BY15 652 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 GSDMCQ9BYG8 508 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 DPEP2Q9H4A9 486 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 TRNAU1APQ9NX07 287 aaKnown RBP14.39□□□□□ -0.11
CMTM3-215ENST00000568477 SEPT10Q9P0V9 454 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 RABGEF1Q9UJ41 708 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 SLC17A4Q9Y2C5 497 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 ENTPD2Q9Y5L3 495 aa14.39□□□□□ -0.11
CMTM3-215ENST00000568477 LAMA5O15230 3695 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 NTN3O00634 580 aaPredicted RBP14.38□□□□□ -0.11
CMTM3-215ENST00000568477 NRDCO43847 1150 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 NOBOXO60393 691 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 LCA5LO95447 670 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 RPLP0P05388 317 aaKnown RBP14.38□□□□□ -0.11
CMTM3-215ENST00000568477 IVLP07476 585 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 CYLC1P35663 651 aaPredicted RBP14.38□□□□□ -0.11
CMTM3-215ENST00000568477 CDKN2BP42772 138 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 TFDP2Q14188 446 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 QPCTQ16769 361 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 C3orf38Q5JPI3 329 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 CERCAMQ5T4B2 595 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 BZW1Q7L1Q6 419 aaKnown RBP14.38□□□□□ -0.11
CMTM3-215ENST00000568477 RAVER1Q8IY67 606 aaKnown RBP14.38□□□□□ -0.11
CMTM3-215ENST00000568477 GPBAR1Q8TDU6 330 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 AGAP3Q96P47 875 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 GFM1Q96RP9 751 aaKnown RBP14.38□□□□□ -0.11
CMTM3-215ENST00000568477 MLPHQ9BV36 600 aaPredicted RBP14.38□□□□□ -0.11
CMTM3-215ENST00000568477 RIOK2Q9BVS4 552 aaKnown RBP14.38□□□□□ -0.11
CMTM3-215ENST00000568477 CEP41Q9BYV8 373 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 SUFUQ9UMX1 484 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 SATB2Q9UPW6 733 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 PCDHA13Q9Y5I0 950 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 ALG6Q9Y672 507 aa14.38□□□□□ -0.11
CMTM3-215ENST00000568477 ARHGEF17Q96PE2 2063 aaPredicted RBP14.38□□□□□ -0.11
CMTM3-215ENST00000568477 C1orf232A0A0U1RR37 186 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 ANKRD66B4E2M5 251 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 D6RAR5 112 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 CASC3O15234 703 aaKnown RBP14.37□□□□□ -0.11
CMTM3-215ENST00000568477 CLDN7O95471 211 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 SOD1P00441 154 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 FUCA1P04066 466 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 GLB1P16278 677 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 ITPKBP27987 946 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 RBMS1P29558 406 aaKnown RBP14.37□□□□□ -0.11
CMTM3-215ENST00000568477 POLD2P49005 469 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 NR2C2P49116 596 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 PCBP4P57723 403 aaKnown RBP14.37□□□□□ -0.11
CMTM3-215ENST00000568477 ERVPABLB-1P60509 514 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 CCL7P80098 99 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 HLTFQ14527 1009 aaKnown RBP eCLIP14.37□□□□□ -0.11
CMTM3-215ENST00000568477 TAZQ16635 292 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 SPOCD1Q6ZMY3 1216 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 TRIM74Q86UV6 250 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 NT5DC3Q86UY8 548 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 NRROSQ86YC3 692 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 CCNJLQ8IV13 435 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 WDR36Q8NI36 951 aaKnown RBP14.37□□□□□ -0.11
CMTM3-215ENST00000568477 CCHCR1Q8TD31 782 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 IMP4Q96G21 291 aaKnown RBP14.37□□□□□ -0.11
CMTM3-215ENST00000568477 HIC2Q96JB3 615 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 OR2M4Q96R27 311 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 CDH19Q9H159 772 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 SLC25A51Q9H1U9 297 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 LRRN3Q9H3W5 708 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 GOLPH3Q9H4A6 298 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 THSD1Q9NS62 852 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 PKD2L2Q9NZM6 624 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 TAAR2Q9P1P5 351 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 APPL1Q9UKG1 709 aa14.37□□□□□ -0.11
CMTM3-215ENST00000568477 COL27A1Q8IZC6 1860 aaPredicted RBP14.37□□□□□ -0.11
CMTM3-215ENST00000568477 IGSF10Q6WRI0 2623 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 ATRXP46100 2492 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 UNC13CQ8NB66 2214 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 CCDC187A0A096LP49 1063 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 A0A0A6YYK5 440 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-215ENST00000568477 A0A1W2PNU3 283 aaPredicted RBP14.36□□□□□ -0.11
CMTM3-215ENST00000568477 TMX2-CTNND1H3BSU7 103 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 INPP4BO15327 924 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 NUDT21O43809 227 aaKnown RBP14.36□□□□□ -0.11
CMTM3-215ENST00000568477 CST8O60676 142 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 PNLIPP16233 465 aa14.36□□□□□ -0.11
CMTM3-215ENST00000568477 ADCY8P40145 1251 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms