RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NAGLUP54802 743 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 AQP5P55064 265 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ST8SIA6P61647 398 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 KDSRQ06136 332 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 GRM2Q14416 872 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 DMC1Q14565 340 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TSNAXIP1Q2TAA8 658 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 RNF43Q68DV7 783 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TANGO2Q6ICL3 276 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 USP45Q70EL2 814 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 YTHDF3Q7Z739 585 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 MTDHQ86UE4 582 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 WDR75Q8IWA0 830 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 RAB3IL1Q8TBN0 382 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TIFAQ96CG3 184 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 MRPL38Q96DV4 380 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 RILPQ96NA2 401 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ABCG8Q9H221 673 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 MRPL46Q9H2W6 279 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 ALG9Q9H6U8 611 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ASB8Q9H765 288 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 ZFP14Q9HCL3 533 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 INTS10Q9NVR2 710 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 HEY2Q9UBP5 337 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 TSR3Q9UJK0 312 aaKnown RBP7.05□□□□□ -1.28
SMG1-215ENST00000568239 ATG2AQ2TAZ0 1938 aa7.05□□□□□ -1.28
SMG1-215ENST00000568239 DCTN3O75935 186 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 TGDSO95455 350 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 NFATC1O95644 943 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 DLDP09622 509 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 UGT1A6P19224 532 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 TFEBP19484 476 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 UGT1A1P22309 533 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 UGT1A4P22310 534 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 XPAP23025 273 aaPredicted RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 UGT1A3P35503 534 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 UGT1A5P35504 534 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 ABCE1P61221 599 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 RPL26P61254 145 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 MESP2Q0VG99 397 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 TYSND1Q2T9J0 566 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 ARSIQ5FYB1 569 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 LRRC66Q68CR7 880 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 TMEM207Q6UWW9 146 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 GDPD4Q6W3E5 623 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 NAPRTQ6XQN6 538 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 GALNT7Q86SF2 657 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 GPR149Q86SP6 731 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 OR2A12Q8NGT7 310 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 PIWIL2Q8TC59 973 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.04□□□□□ -1.28
SMG1-215ENST00000568239 ISG20Q96AZ6 181 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 PHF21BQ96EK2 531 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 SLC2A11Q9BYW1 496 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 CEP44Q9C0F1 390 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 MYLK2Q9H1R3 596 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 KDM4CQ9H3R0 1056 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 ZDHHC4Q9NPG8 344 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 DZANK1Q9NVP4 752 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 OXSMQ9NWU1 459 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 THG1LQ9NWX6 298 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 TAS2R13Q9NYV9 303 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 GTSE1Q9NYZ3 720 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 MARK1Q9P0L2 795 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 DEC1Q9P2X7 70 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 RPL26L1Q9UNX3 145 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 F5P12259 2224 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 CAPN8A6NHC0 703 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 IQCF5A8MTL0 148 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 NIPSNAP2O75323 286 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 SNNO75324 88 aaPredicted RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 LEFTY1O75610 366 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 POU2F2P09086 479 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 SBK3P0C264 359 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 TCF3P15923 654 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 SERPINB3P29508 390 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 CCR10P46092 362 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 CSRP3P50461 194 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 HYAL1Q12794 435 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 KCNC3Q14003 757 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 AARS2Q5JTZ9 985 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 CFAP157Q5JU67 520 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 ATAT1Q5SQI0 421 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 COL13A1Q5TAT6 717 aaPredicted RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 LIPMQ5VYY2 423 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 ZYG11AQ6WRX3 759 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 TTC7BQ86TV6 843 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 YAF2Q8IY57 180 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 LPGAT1Q92604 370 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 PBXIP1Q96AQ6 731 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 SCRN2Q96FV2 425 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 PPP1R36Q96LQ0 422 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 GPR78Q96P69 363 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 CDCA3Q99618 268 aaPredicted RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 GDF15Q99988 308 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 MRPL57Q9BQC6 102 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 HEPHQ9BQS7 1158 aa7.04□□□□□ -1.28
SMG1-215ENST00000568239 AARSD1Q9BTE6 412 aaKnown RBP7.04□□□□□ -1.28
SMG1-215ENST00000568239 GATA5Q9BWX5 397 aaPredicted RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms