RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 PSTPIP1O43586 416 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CST8O60676 142 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 ZRANB2O95218 330 aaKnown RBP eCLIP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CLDN7O95471 211 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 MPOP05164 745 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 FGF1P05230 155 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 PYGLP06737 847 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 IVLP07476 585 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 PNLIPP16233 465 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 GLB1P16278 677 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 EIF2S3P41091 472 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CD86P42081 329 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CDKN2BP42772 138 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 GNPDA1P46926 289 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 POLD2P49005 469 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 STC1P52823 247 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 DYNLT1P63172 113 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CCL7P80098 99 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SKOR1P84550 965 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CDK3Q00526 305 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 ILF3Q12906 894 aaKnown RBP eCLIP6.89□□□□□ -1.313e-7■■■□□ 16.3
SF3B3-209ENST00000567635 ZBTB17Q13105 803 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 PEX6Q13608 980 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SPIDRQ14159 915 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 TAZQ16635 292 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 QPCTQ16769 361 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 COL28A1Q2UY09 1125 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 TBC1D25Q3MII6 688 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 TEX44Q53QW1 395 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 TFDP3Q5H9I0 405 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 KAZNQ674X7 775 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CCDC70Q6NSX1 233 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 MFSD7Q6UXD7 560 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SPOCD1Q6ZMY3 1216 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 LRRC69Q6ZNQ3 347 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 ZNF765Q7L2R6 523 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 KDELC2Q7Z4H8 507 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 NT5DC3Q86UY8 548 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 TMTC1Q8IUR5 882 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 Q8N9G6 341 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 KYQ8NBH2 561 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 LPCAT1Q8NF37 534 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 EXD1Q8NHP7 514 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CCL4L1Q8NHW4 92 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 KIAA1524Q8TCG1 905 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CCHCR1Q8TD31 782 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SCAMP4Q969E2 229 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CCDC74AQ96AQ1 378 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 IMP4Q96G21 291 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SCARF2Q96GP6 870 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 ATXN7L3BQ96GX2 97 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 MRFAP1L1Q96HT8 127 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CALR3Q96L12 384 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 AGAP3Q96P47 875 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 OLFM3Q96PB7 478 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 GFM1Q96RP9 751 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 LYSMD1Q96S90 227 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 RIOK2Q9BVS4 552 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 TDRD1Q9BXT4 1180 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 GSDMCQ9BYG8 508 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SLC25A51Q9H1U9 297 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 FAM83DQ9H4H8 585 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CARS2Q9HA77 564 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SPATS2LQ9NUQ6 558 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 TRNAU1APQ9NX07 287 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SEPT10Q9P0V9 454 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 LRIT1Q9P2V4 623 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SAE1Q9UBE0 346 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 CD84Q9UIB8 345 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 RABGEF1Q9UJ41 708 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 APPL1Q9UKG1 709 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 RALYQ9UKM9 306 aaKnown RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SLC17A4Q9Y2C5 497 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 TMEM98Q9Y2Y6 226 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 ENTPD2Q9Y5L3 495 aa6.89□□□□□ -1.31
SF3B3-209ENST00000567635 EPN1Q9Y6I3 576 aaPredicted RBP6.89□□□□□ -1.31
SF3B3-209ENST00000567635 FREM2Q5SZK8 3169 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 C1orf232A0A0U1RR37 186 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 RGSL1A5PLK6 1076 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 B4DGG1 531 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 MTSS1O43312 755 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 TLX3O43711 291 aaPredicted RBP6.88□□□□□ -1.31
SF3B3-209ENST00000567635 NOBOXO60393 691 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 DXOO77932 396 aaKnown RBP6.88□□□□□ -1.31
SF3B3-209ENST00000567635 NDUFA10O95299 355 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 SOD1P00441 154 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 RBMS1P29558 406 aaKnown RBP6.88□□□□□ -1.31
SF3B3-209ENST00000567635 ADCY8P40145 1251 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 SPINT3P49223 89 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 ERVPABLB-1P60509 514 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 GABREP78334 506 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 CTBSQ01459 385 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 LLGL1Q15334 1064 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 SLC14A2Q15849 920 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 C14orf28Q4W4Y0 310 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 PYCR3Q53H96 274 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 CERCAMQ5T4B2 595 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 C11orf63Q6NUN7 778 aa6.88□□□□□ -1.31
SF3B3-209ENST00000567635 DOK6Q6PKX4 331 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms