RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 CACNA2D2Q9NY47 1150 aa17.71■□□□□ 0.43
CMTM3-214ENST00000567572 INSL5Q9Y5Q6 135 aa17.71■□□□□ 0.43
CMTM3-214ENST00000567572 NEMP2A6NFY4 417 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 TEX28O15482 410 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 STC2O76061 302 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 KCNA5P22460 613 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 HERVK_113P63132 956 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 TRIM25Q14258 630 aaKnown RBP17.7■□□□□ 0.42
CMTM3-214ENST00000567572 FASTKQ14296 549 aaKnown RBP17.7■□□□□ 0.42
CMTM3-214ENST00000567572 TAF12Q16514 161 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 FOXB2Q5VYV0 432 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 KDELC2Q7Z4H8 507 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 MFN1Q8IWA4 741 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 PHC3Q8NDX5 983 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 OR6P1Q8NGX9 317 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 ZNF483Q8TF39 744 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-214ENST00000567572 HDAC10Q969S8 669 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 ERVK-6Q9BXR3 956 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 SLC24A3Q9HC58 644 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.7■□□□□ 0.42
CMTM3-214ENST00000567572 PLK2Q9NYY3 685 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 TRAF6Q9Y4K3 522 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 PCDHGA7Q9Y5G6 932 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 ANAPC1Q9H1A4 1944 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 CHD5Q8TDI0 1954 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 SMIM31A0A1B0GVY4 71 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 CCDC189A1A4V9 331 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 C2orf78A6NCI8 922 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 CFLARO15519 480 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 PRAMEF11O60813 436 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 GPC4O75487 556 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 GLP2RO95838 553 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 KLKB1P03952 638 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 SNRPB2P08579 225 aaKnown RBP17.7■□□□□ 0.42
CMTM3-214ENST00000567572 DPP6P42658 865 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 LRP8Q14114 963 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 UGT2A3Q6UWM9 527 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 C16orf59Q7L2K0 433 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 PTAR1Q7Z6K3 402 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-214ENST00000567572 DNAJB7Q7Z6W7 309 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-214ENST00000567572 TMEM150AQ86TG1 271 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 ISCA2Q86U28 154 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 DENND1CQ8IV53 801 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 KLHL5Q96PQ7 755 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 KLF16Q9BXK1 252 aaPredicted RBP17.7■□□□□ 0.42
CMTM3-214ENST00000567572 RNF38Q9H0F5 515 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 ZBP1Q9H171 429 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 CYP4F12Q9HCS2 524 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 SPAG4Q9NPE6 437 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 INTS10Q9NVR2 710 aaKnown RBP17.7■□□□□ 0.42
CMTM3-214ENST00000567572 SLC4A7Q9Y6M7 1214 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 MIA3Q5JRA6 1907 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 PLXNA4Q9HCM2 1894 aa17.7■□□□□ 0.42
CMTM3-214ENST00000567572 KIAA0100Q14667 2235 aaKnown RBP17.69■□□□□ 0.42
CMTM3-214ENST00000567572 H3BNC9 293 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 RPP40O75818 363 aaKnown RBP17.69■□□□□ 0.42
CMTM3-214ENST00000567572 FGF18O76093 207 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 FGF4P08620 206 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 PABPC4LP0CB38 370 aaKnown RBP17.69■□□□□ 0.42
CMTM3-214ENST00000567572 ACVRL1P37023 503 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 PKNOX1P55347 436 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 C1QTNF8P60827 252 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 MAXP61244 160 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 HTRA4P83105 476 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-214ENST00000567572 CREMQ03060 361 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 RAB44Q7Z6P3 723 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-214ENST00000567572 CFAP52Q8N1V2 620 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 BBS5Q8N3I7 341 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 BRSK1Q8TDC3 778 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 ANKRD49Q8WVL7 239 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 NCSTNQ92542 709 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 ROPN1LQ96C74 230 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 TMA16Q96EY4 203 aaKnown RBP17.69■□□□□ 0.42
CMTM3-214ENST00000567572 PRICKLE1Q96MT3 831 aaPredicted RBP17.69■□□□□ 0.42
CMTM3-214ENST00000567572 CYP2S1Q96SQ9 504 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 NPAS2Q99743 824 aa17.69■□□□□ 0.42
CMTM3-214ENST00000567572 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.69■□□□□ 0.424e-6■■□□□ 12.2
CMTM3-214ENST00000567572 C15orf38-AP3S2A0A0A6YYH1 394 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 CAPN8A6NHC0 703 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 TRIM24O15164 1050 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 CD1EP15812 388 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 CORO1AP31146 461 aaKnown RBP17.68■□□□□ 0.42
CMTM3-214ENST00000567572 ARSDP51689 593 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 EPHB3P54753 998 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 CDKN2DP55273 166 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 STX1BP61266 288 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 MS4A2Q01362 244 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 ZNF235Q14590 738 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 TYSND1Q2T9J0 566 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 SAMD4BQ5PRF9 694 aaKnown RBP17.68■□□□□ 0.42
CMTM3-214ENST00000567572 REP15Q6BDI9 236 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 C8orf82Q6P1X6 216 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-214ENST00000567572 GK5Q6ZS86 529 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 LARP4Q71RC2 724 aaKnown RBP eCLIP17.68■□□□□ 0.42
CMTM3-214ENST00000567572 ARPINQ7Z6K5 226 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 RNF135Q8IUD6 432 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 CLYBLQ8N0X4 340 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 DNAJC5GQ8N7S2 189 aa17.68■□□□□ 0.42
CMTM3-214ENST00000567572 USP13Q92995 863 aaPredicted RBP17.68■□□□□ 0.42
CMTM3-214ENST00000567572 MARK4Q96L34 752 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms