RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 CEP97Q8IW35 865 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 FBXL13Q8NEE6 735 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 NEK11Q8NG66 645 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 OR52K2Q8NGK3 314 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 UBA3Q8TBC4 463 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 ITLN2Q8WWU7 325 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-216ENST00000567071 TM9SF4Q92544 642 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 PDLIM2Q96JY6 352 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 SLC38A3Q99624 504 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 SMAD5Q99717 465 aaKnown RBP9.69□□□□□ -0.86
CAPN3-216ENST00000567071 BARD1Q99728 777 aaKnown RBP9.69□□□□□ -0.86
CAPN3-216ENST00000567071 WRAP53Q9BUR4 548 aaKnown RBP9.69□□□□□ -0.86
CAPN3-216ENST00000567071 OSBPL1AQ9BXW6 950 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 GSX1Q9H4S2 264 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-216ENST00000567071 APOBEC3GQ9HC16 384 aaKnown RBP9.69□□□□□ -0.86
CAPN3-216ENST00000567071 FGF22Q9HCT0 170 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 SIX2Q9NPC8 291 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 CISHQ9NSE2 258 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 TAAR2Q9P1P5 351 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 HECAQ9UBI9 543 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-216ENST00000567071 AJAP1Q9UKB5 411 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-216ENST00000567071 TBC1D30Q9Y2I9 924 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 PCDHGB6Q9Y5F9 930 aa9.69□□□□□ -0.86
CAPN3-216ENST00000567071 GOLGA6L6A8MZA4 724 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 PDE2AO00408 941 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-216ENST00000567071 PIK3R2O00459 728 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 AREL1O15033 823 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 PPM1DO15297 605 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 GYPCP04921 128 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 PTMAP06454 111 aaKnown RBP9.68□□□□□ -0.86
CAPN3-216ENST00000567071 FOSL1P15407 271 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 ZNF28P17035 718 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 PTPN4P29074 926 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 DEKP35659 375 aaKnown RBP9.68□□□□□ -0.86
CAPN3-216ENST00000567071 RGS7P49802 495 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 POLR2FP61218 127 aaKnown RBP9.68□□□□□ -0.86
CAPN3-216ENST00000567071 ELP6Q0PNE2 266 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 KYNUQ16719 465 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 CYB5D1Q6P9G0 228 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 RPTNQ6XPR3 784 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 ZNF517Q6ZMY9 492 aaPredicted RBP9.68□□□□□ -0.86
CAPN3-216ENST00000567071 KCNMB4Q86W47 210 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 ARHGEF19Q8IW93 802 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 EHBP1Q8NDI1 1231 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 CCL4L1Q8NHW4 92 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 LMO3Q8TAP4 145 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 NCSTNQ92542 709 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 NT5C1BQ96P26 610 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 PSMB7Q99436 277 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 PRMT1Q99873 361 aaKnown RBP9.68□□□□□ -0.86
CAPN3-216ENST00000567071 GANQ9H2C0 597 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 NLRC4Q9NPP4 1024 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 LHX9Q9NQ69 397 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 RAB20Q9NX57 234 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 APEX2Q9UBZ4 518 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 KLHL3Q9UH77 587 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 VANGL2Q9ULK5 521 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 COQ4Q9Y3A0 265 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.68□□□□□ -0.86
CAPN3-216ENST00000567071 FHOD1Q9Y613 1164 aa9.68□□□□□ -0.86
CAPN3-216ENST00000567071 PRRC2AP48634 2157 aaKnown RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 PRSS38A1L453 326 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 TMEM202A6NGA9 273 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 RNF225M0QZC1 329 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 KRIT1O00522 736 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 PMM2O15305 246 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 TMEM63AO94886 807 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 UGT2B4P06133 528 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 PLEKP08567 350 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 TPM1P09493 284 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 SERPINH1P50454 418 aaKnown RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 NDST2P52849 883 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 PDE1BQ01064 536 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 TBX2Q13207 712 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 IL11RAQ14626 422 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 POLD3Q15054 466 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 LRRC73Q5JTD7 316 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 KLHDC7AQ5VTJ3 777 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 HGSNATQ68CP4 663 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 DPY19L2P1Q6NXN4 242 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 NYAP1Q6ZVC0 841 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 MED25Q71SY5 747 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 RRAGAQ7L523 313 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 PPM1KQ8N3J5 372 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 ZADH2Q8N4Q0 377 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 TMEM102Q8N9M5 508 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 RELTQ969Z4 430 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 RNF31Q96EP0 1072 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 FAXDC2Q96IV6 333 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 KLHL32Q96NJ5 620 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 TM6SF2Q9BZW4 377 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 TTYH3Q9C0H2 523 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 MIS12Q9H081 205 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 STN1Q9H668 368 aaKnown RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 SUDS3Q9H7L9 328 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 CARS2Q9HA77 564 aaKnown RBP9.67□□□□□ -0.86
CAPN3-216ENST00000567071 PLCB1Q9NQ66 1216 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 ARHGEF38Q9NXL2 777 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 NTNG1Q9Y2I2 539 aa9.67□□□□□ -0.86
CAPN3-216ENST00000567071 COQ6Q9Y2Z9 468 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms