RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 GPX3P22352 226 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 ALDH7A1P49419 539 aaKnown RBP16.74■□□□□ 0.27
CMTM3-213ENST00000566756 CDKN2DP55273 166 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 IL10RBQ08334 325 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 PPP1R3AQ16821 1122 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 RTP2Q5QGT7 225 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 C6orf10Q5SRN2 563 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 TMEM207Q6UWW9 146 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 KDELC2Q7Z4H8 507 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 CARM1Q86X55 608 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 SCN4BQ8IWT1 228 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 RNF168Q8IYW5 571 aaPredicted RBP16.74■□□□□ 0.27
CMTM3-213ENST00000566756 GALNT4Q8N4A0 578 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 METTL25Q8N6Q8 603 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 PACRGLQ8N7B6 248 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 HDAC10Q969S8 669 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 SLCO4A1Q96BD0 722 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 PHF21BQ96EK2 531 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 GPATCH1Q9BRR8 931 aaKnown RBP16.74■□□□□ 0.27
CMTM3-213ENST00000566756 TTPALQ9BTX7 342 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 TRIM15Q9C019 465 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 CWH43Q9H720 699 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 SP110Q9HB58 689 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 ABCD2Q9UBJ2 740 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 FIS1Q9Y3D6 152 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 DOCK4Q8N1I0 1966 aa16.74■□□□□ 0.27
CMTM3-213ENST00000566756 FAM92AA1XBS5 289 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 NT5C1B-RDH14C9J2C7 533 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 LDB2O43679 373 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 SUPT7LO94864 414 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 TIMP1P01033 207 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 ATXN1LP0C7T5 689 aaKnown RBP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 BMP2P12643 396 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 CD1DP15813 335 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 HLA-DPA1P20036 260 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 OGNP20774 298 aaKnown RBP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 MRPL19P49406 292 aaKnown RBP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 PGFP49763 221 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 TBX4P57082 545 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 SLC10A7Q0GE19 358 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 LRRC26Q2I0M4 334 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 SIRPB2Q5JXA9 342 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 GPR158Q5T848 1215 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 PTAR1Q7Z6K3 402 aaPredicted RBP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 RAB44Q7Z6P3 723 aaPredicted RBP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 TMEM173Q86WV6 379 aaPredicted RBP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 DHFR2Q86XF0 187 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 HERC6Q8IVU3 1022 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 ATP6V0D2Q8N8Y2 350 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 ARRDC2Q8TBH0 407 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 TSPEARQ8WU66 669 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 ZNF689Q96CS4 500 aaPredicted RBP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 PRPF18Q99633 342 aaKnown RBP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 PCDHAC1Q9H158 963 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 ALG9Q9H6U8 611 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 COQ10BQ9H8M1 238 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 C7orf72A4D263 438 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 KLHL33A6NCF5 533 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 AQP12BA6NM10 295 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 KIAA0355O15063 1070 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 EFCAB14O75071 495 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 VPS4BO75351 444 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 MATN4O95460 622 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 FGF1P05230 155 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 ETS2P15036 469 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 PLK1P53350 603 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 FOXM1Q08050 763 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 BNIP2Q12982 314 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 MTA1Q13330 715 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 PARP15Q460N3 678 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 MS4A13Q5J8X5 152 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 MRNIPQ6NTE8 343 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 KLHDC10Q6PID8 442 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 FUNDC1Q8IVP5 155 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 AQP12AQ8IXF9 295 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 MINDY1Q8N5J2 469 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 OR2T34Q8NGX1 318 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 OR6P1Q8NGX9 317 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 OR2T3Q8NH03 318 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 LRTOMTQ8WZ04 291 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 FEM1CQ96JP0 617 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 TFB2MQ9H5Q4 396 aaKnown RBP16.73■□□□□ 0.27
CMTM3-213ENST00000566756 C8orf4Q9NR00 106 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 COMMD8Q9NX08 183 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 APPL1Q9UKG1 709 aa16.73■□□□□ 0.27
CMTM3-213ENST00000566756 DYTNA2CJ06 578 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 MTMR11A4FU01 709 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 CARNS1A5YM72 827 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 J3KR12 359 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 PBX3P40426 434 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 ARSDP51689 593 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 TUBA4AP68366 448 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 DSC2Q02487 901 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 MAP7D1Q3KQU3 841 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 PPP4R4Q6NUP7 873 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 TRPC4APQ8TEL6 797 aa16.72■□□□□ 0.27
CMTM3-213ENST00000566756 BCL7CQ8WUZ0 217 aaPredicted RBP16.72■□□□□ 0.27
CMTM3-213ENST00000566756 BTN2A3PQ96KV6 586 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms